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    beta-1,4-N-acetylglucosaminyltransferase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 815815, updated on 18-Sep-2024

    Summary

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    Official Full Name
    beta-1,4-N-acetylglucosaminyltransferase family protein
    Primary source
    TAIR:AT2G13290
    Locus tag
    AT2G13290
    See related
    Araport:AT2G13290
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F15O11.7; F15O11_7
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    2
    Sequence:
    Chromosome: 2; NC_003071.7 (5511562..5513838)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene pseudo Neighboring gene protease inhibitor/seed storage/lipid transfer family protein Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_126919.5
    NM_201720.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables glycosyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    involved_in protein N-linked glycosylation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in Golgi apparatus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    beta-1,4-N-acetylglucosaminyltransferase family protein
    NP_178963.1
    • beta-1,4-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: protein amino acid N-linked glycosylation; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 17 (InterPro:IPR006813); BEST Arabidopsis thaliana protein match is: beta-1,4-N-acetylglucosaminyltransferase family protein (TAIR:AT1G12990.1); Has 1150 Blast hits to 1147 proteins in 93 species: Archae - 0; Bacteria - 44; Metazoa - 57; Fungi - 35; Plants - 130; Viruses - 4; Other Eukaryotes - 880 (source: NCBI BLink).
    NP_973449.1
    • beta-1,4-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: protein amino acid N-linked glycosylation; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 17 (InterPro:IPR006813); BEST Arabidopsis thaliana protein match is: beta-1,4-N-acetylglucosaminyltransferase family protein (TAIR:AT1G12990.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      5511562..5513838
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_126919.5 → NP_178963.1  beta-1,4-N-acetylglucosaminyltransferase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_178963.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VNN2, Q9SKF0
      Conserved Domains (1) summary
      pfam04724
      Location:8 → 360
      Glyco_transf_17; Glycosyltransferase family 17

    2. NM_201720.2 → NP_973449.1  beta-1,4-N-acetylglucosaminyltransferase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_973449.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VNN2, Q9SKF0
      Conserved Domains (1) summary
      pfam04724
      Location:8 → 360
      Glyco_transf_17; Glycosyltransferase family 17
    Nucleotide Protein
    Heading Accession and Version

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