APG9 autophagy 9 (APG9) [Arabidopsis thaliana (thale cress)] - Gene

Summary

Official Symbol: APG9
Official Full Name: autophagy 9 (APG9)
Primary source: TAIR:AT2G31260
Locus tag: AT2G31260
See related: Araport:AT2G31260
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: ATAPG9; ATG9; autophagy 9; F16D14.10; F16D14_10
Summary: Involved in autophagy, the process of vacuolar bulk degradation of cytoplasmic components. Mutant shows accelerated bolting and senescence.
NEW: Try the new Gene table
Try the new Transcript table

Chromosome 2 - NC_003071.7 Genomic Context describing neighboring genes

Go to nucleotide: Graphics FASTA GenBank

Arabidopsis AUTOPHAGY-RELATED2 is essential for ATG18a and ATG9 trafficking during autophagosome closure.
Title: Arabidopsis AUTOPHAGY-RELATED2 is essential for ATG18a and ATG9 trafficking during autophagosome closure.
Subnanometer resolution cryo-EM structure of Arabidopsis thaliana ATG9.
Title: Subnanometer resolution cryo-EM structure of Arabidopsis thaliana ATG9.
Data suggest that PI3K, ATG11 and ATG9 act upstream of ATG2 in Arabidopsis.
Title: Autophagy-related (ATG) 11, ATG9 and the phosphatidylinositol 3-kinase control ATG2-mediated formation of autophagosomes in Arabidopsis.
ATG9 and phosphatidylinositol kinase activity contribute to efficient autophagy in Arabidopsis.
Title: A revised assay for monitoring autophagic flux in Arabidopsis thaliana reveals involvement of AUTOPHAGY-RELATED9 in autophagy.
results suggest that both AtAtg2 and AtAtg5 proteins are essential for autophagy whereas AtAtg9 protein contributes to, but is not essential for, autophagy in Arabidopsis root tip cells [Atg9]
Title: AtATG genes, homologs of yeast autophagy genes, are involved in constitutive autophagy in Arabidopsis root tip cells.

Submit: New GeneRIF Correction

Products	Interactant	Other Gene	Complex	Source	Pubs	Description

NM_179833.2

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within autophagy	IMP Inferred from Mutant Phenotype more info	PubMed
acts_upstream_of_or_within autophagy	ISS Inferred from Sequence or Structural Similarity more info	PubMed
involved_in defense response to fungus	IEP Inferred from Expression Pattern more info	PubMed
involved_in response to heat	IEP Inferred from Expression Pattern more info	PubMed

Component	Evidence Code	Pubs
located_in chloroplast	ISM Inferred from Sequence Model more info

NP_850164.1

autophagy 9 (APG9); CONTAINS InterPro DOMAIN/s: Autophagy-related protein 9 (InterPro:IPR007241); Has 489 Blast hits to 477 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 214; Fungi - 166; Plants - 51; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink).