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    ferredoxin thioredoxin reductase catalytic beta chain family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 815013, updated on 18-Sep-2024

    Summary

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    Official Full Name
    ferredoxin thioredoxin reductase catalytic beta chain family protein
    Primary source
    TAIR:AT2G04700
    Locus tag
    AT2G04700
    See related
    Araport:AT2G04700
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F28I8.26; F28I8_26
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    7
    Sequence:
    Chromosome: 2; NC_003071.7 (1646799..1649037)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Cysteine/Histidine-rich C1 domain family protein Neighboring gene Pyridoxamine 5'-phosphate oxidase family protein Neighboring gene pseudo Neighboring gene miscRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Ferredoxin/thioredoxin system plays an important role in the chloroplastic NADP status of Arabidopsis. Hashida SN, et al. Plant J, 2018 Sep. PMID 29920827
    2. Ferredoxin:thioredoxin reductase is required for proper chloroplast development and is involved in the regulation of plastid gene expression in Arabidopsis thaliana. Wang P, et al. Mol Plant, 2014 Oct. PMID 24890758
    3. Distinct electron transfer from ferredoxin-thioredoxin reductase to multiple thioredoxin isoforms in chloroplasts. Yoshida K, et al. Biochem J, 2017 Apr 4. PMID 28246333
    4. A split-ubiquitin yeast two-hybrid screen to examine the substrate specificity of atToc159 and atToc132, two Arabidopsis chloroplast preprotein import receptors. Dutta S, et al. PLoS One, 2014. PMID 24736607, Free PMC Article
    5. AT_CHLORO, a comprehensive chloroplast proteome database with subplastidial localization and curated information on envelope proteins. Ferro M, et al. Mol Cell Proteomics, 2010 Jun. PMID 20061580, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Data suggest that all 10 chloroplast Trx (thioredoxin) isoforms are commonly reduced by Ftr (ferredoxin- thioredoxin reductase), however, significantly different efficiencies are evident in the kinetics of electron transfer; the reduction rate of Trx-m4 was higher than that of other Trx-m isoforms.
      Title: Distinct electron transfer from ferredoxin-thioredoxin reductase to multiple thioredoxin isoforms in chloroplasts.
    2. FTR is required for plastid-encoded RNA polymerase (PEP)-dependent plastid gene expression at the early stages of chloroplast development. FTRc is required for leaf greening particularly in young tissue. [FTRc]
      Title: Ferredoxin:thioredoxin reductase is required for proper chloroplast development and is involved in the regulation of plastid gene expression in Arabidopsis thaliana.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_126500.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables 4 iron, 4 sulfur cluster binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables electron transfer activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables ferredoxin-thioredoxin reductase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables ferredoxin-thioredoxin reductase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ferredoxin-thioredoxin reductase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables oxidoreductase activity, acting on iron-sulfur proteins as donors IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast HDA PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in chloroplast envelope HDA PubMed 
    located_in chloroplast stroma HDA PubMed 

    General protein information

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    Preferred Names
    ferredoxin thioredoxin reductase catalytic beta chain family protein
    NP_178547.1
    • ferredoxin thioredoxin reductase catalytic beta chain family protein; FUNCTIONS IN: ferredoxin:thioredoxin reductase activity, ferredoxin reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin thioredoxin reductase, beta subunit (InterPro:IPR004209); Has 267 Blast hits to 267 proteins in 113 species: Archae - 18; Bacteria - 139; Metazoa - 0; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      1646799..1649037
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001335244.1 → NP_001323777.1  ferredoxin thioredoxin reductase catalytic beta chain family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AY16

    2. NM_001335245.1 → NP_001323778.1  ferredoxin thioredoxin reductase catalytic beta chain family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SJ89
      UniProtKB/TrEMBL
      A0A178VTW5, A0A5S9WX49, A0A7G2E9T2
      Conserved Domains (1) summary
      cl01977
      Location:39 → 141
      FeThRed_B; Ferredoxin thioredoxin reductase catalytic beta chain

    3. NM_126500.5 → NP_178547.1  ferredoxin thioredoxin reductase catalytic beta chain family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_178547.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SJ89
      UniProtKB/TrEMBL
      A0A178VTW5, A0A5S9WX49, A0A7G2E9T2
      Conserved Domains (1) summary
      cl01977
      Location:39 → 141
      FeThRed_B; Ferredoxin thioredoxin reductase catalytic beta chain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SJ89.1

    Gene LinkOut

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