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    Exostosin family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843807, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Exostosin family protein
    Primary source
    TAIR:AT1G74680
    Locus tag
    AT1G74680
    See related
    Araport:AT1G74680
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F25A4.34; F25A4_34
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (28059108..28061130)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Gibberellin-regulated family protein Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene IQ-domain 31 Neighboring gene tRNAse Z1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A DEK domain-containing protein modulates chromatin structure and function in Arabidopsis. Waidmann S, et al. Plant Cell, 2014 Nov. PMID 25387881, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_106126.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in protein glycosylation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in Golgi apparatus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Exostosin family protein
    NP_565089.1
    • Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: exostosin family protein (TAIR:AT3G45400.1); Has 1193 Blast hits to 1185 proteins in 64 species: Archae - 0; Bacteria - 4; Metazoa - 45; Fungi - 4; Plants - 1081; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      28059108..28061130
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_106126.5 → NP_565089.1  Exostosin family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565089.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WIE2, A0A7G2E528, Q93ZD5, Q9S7E2
      Conserved Domains (1) summary
      pfam03016
      Location:75 → 391
      Exostosin; Exostosin family
    Nucleotide Protein
    Heading Accession and Version

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