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    CPK30 calcium-dependent protein kinase 30 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843813, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CPK30
    Official Full Name
    calcium-dependent protein kinase 30
    Primary source
    TAIR:AT1G74740
    Locus tag
    AT1G74740
    See related
    Araport:AT1G74740
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATCPK30; CALCIUM-DEPENDENT PROTEIN KINASE 1A; calcium-dependent protein kinase 30; CDPK1A; F25A4.29; F25A4_29
    Summary
    member of Calcium Dependent Protein Kinase
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    Genomic context

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    See CPK30 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    7
    Sequence:
    Chromosome: 1; NC_003070.9 (28079946..28082671, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene C2 calcium/lipid-binding plant phosphoribosyltransferase family protein Neighboring gene transmembrane protein, putative (DUF1118) Neighboring gene ncRNA Neighboring gene Pentatricopeptide repeat (PPR) superfamily protein Neighboring gene zinc ion binding protein Neighboring gene Nodulin-like / Major Facilitator Superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A calcium-dependent protein kinase is involved in plant hormone signal transduction in Arabidopsis. Yuan X, et al. Zhi Wu Sheng Li Yu Fen Zi Sheng Wu Xue Xue Bao, 2007 Jun. PMID 17556810
    2. Ca2+-dependent protein kinases and stress signal transduction in plants. Sheen J. Science, 1996 Dec 13. PMID 8943201
    3. Arabidopsis calcium-dependent protein kinase AtCPK32 interacts with ABF4, a transcriptional regulator of abscisic acid-responsive gene expression, and modulates its activity. Choi HI, et al. Plant Physiol, 2005 Dec. PMID 16299177, Free PMC Article
    4. Differential binding of calmodulin-related proteins to their targets revealed through high-density Arabidopsis protein microarrays. Popescu SC, et al. Proc Natl Acad Sci U S A, 2007 Mar 13. PMID 17360592, Free PMC Article
    5. MAPK target networks in Arabidopsis thaliana revealed using functional protein microarrays. Popescu SC, et al. Genes Dev, 2009 Jan 1. PMID 19095804, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. The results suggest that AtCPK30 acts as the calcium sensor and involved in the hormone-signaling pathways.
      Title: A calcium-dependent protein kinase is involved in plant hormone signal transduction in Arabidopsis.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_106132.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables protein kinase activity TAS
    Traceable Author Statement
    more info
    		 PubMed 
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within abscisic acid-activated signaling pathway TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    calcium-dependent protein kinase 30
    NP_177612.2
    • calcium-dependent protein kinase 30 (CPK30); FUNCTIONS IN: calmodulin-dependent protein kinase activity, protein kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation, abscisic acid mediated signaling pathway; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 1 (TAIR:AT1G18890.1); Has 129906 Blast hits to 123880 proteins in 3943 species: Archae - 178; Bacteria - 14335; Metazoa - 48347; Fungi - 17163; Plants - 26785; Viruses - 481; Other Eukaryotes - 22617 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      28079946..28082671 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_106132.4 → NP_177612.2  calcium-dependent protein kinase 30 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177612.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SBZ3, Q9SSF8
      UniProtKB/TrEMBL
      A0A178W4G7, A0A5S9WUE6
      Conserved Domains (2) summary
      PTZ00184
      Location:353 → 497
      PTZ00184; calmodulin; Provisional
      cd05117
      Location:58 → 316
      STKc_CAMK; The catalytic domain of CAMK family Serine/Threonine Kinases
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SSF8.1

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