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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001163574.2 → NP_001157046.1 tight junction protein ZO-1 isoform 2
See identical proteins and their annotated locations for NP_001157046.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) lacks an in-frame coding exon in the middle region but has an additional in-frame segment in the 3' coding region, as compared to variant 1. The resulting isoform (2) is shorter than isoform 1.
- Source sequence(s)
-
AC122222, AC131741
- Consensus CDS
-
CCDS52266.1
- UniProtKB/TrEMBL
-
B9EHJ3
- Related
- ENSMUSP00000032729.7, ENSMUST00000032729.8
- Conserved Domains (7) summary
-
- cd12026
Location:517 → 581
- SH3_ZO-1; Src homology 3 domain of the Tight junction protein, Zonula occludens protein 1
- smart00072
Location:615 → 794
- GuKc; Guanylate kinase homologues
- smart00228
Location:183 → 263
- PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
- PHA03247
Location:1142 → 1501
- PHA03247; large tegument protein UL36; Provisional
- cd00992
Location:22 → 107
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- pfam00595
Location:425 → 501
- PDZ; PDZ domain (Also known as DHR or GLGF)
- pfam00791
Location:1553 → 1650
- ZU5; ZU5 domain
-
NM_001417366.1 → NP_001404295.1 tight junction protein ZO-1 isoform 3
Status: VALIDATED
- Source sequence(s)
-
AC122222, AC131741
-
NM_001417367.1 → NP_001404296.1 tight junction protein ZO-1 isoform 4
Status: VALIDATED
- Source sequence(s)
-
AC122222, AC131741
-
NM_001417368.1 → NP_001404297.1 tight junction protein ZO-1 isoform 5
Status: VALIDATED
- Source sequence(s)
-
AC122222, AC131741
-
NM_001417369.1 → NP_001404298.1 tight junction protein ZO-1 isoform 6
Status: VALIDATED
- Source sequence(s)
-
AC131741
- UniProtKB/TrEMBL
-
Q91YW2
-
NM_001417370.1 → NP_001404299.1 tight junction protein ZO-1 isoform 7
Status: VALIDATED
- Source sequence(s)
-
AC131741
- UniProtKB/TrEMBL
-
Q91YW2
-
NM_001417371.1 → NP_001404300.1 tight junction protein ZO-1 isoform 8
Status: VALIDATED
- Source sequence(s)
-
AC131741
- UniProtKB/TrEMBL
-
Q91YW2
-
NM_001417372.1 → NP_001404301.1 tight junction protein ZO-1 isoform 9
Status: VALIDATED
- Source sequence(s)
-
AC131741
- UniProtKB/TrEMBL
-
Q91YW2
-
NM_001417373.1 → NP_001404302.1 tight junction protein ZO-1 isoform 10
Status: VALIDATED
- Source sequence(s)
-
AC122222, AC122809
-
NM_001417374.1 → NP_001404303.1 tight junction protein ZO-1 isoform 11
Status: VALIDATED
- Source sequence(s)
-
AC122222
-
NM_009386.3 → NP_033412.2 tight junction protein ZO-1 isoform 1
See identical proteins and their annotated locations for NP_033412.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes isoform 1.
- Source sequence(s)
-
AC122222, AC131741
- Consensus CDS
-
CCDS21338.1
- UniProtKB/Swiss-Prot
- E9QK00, P39447
- Related
- ENSMUSP00000099652.4, ENSMUST00000102592.10
- Conserved Domains (6) summary
-
- smart00218
Location:1629 → 1735
- ZU5; Domain present in ZO-1 and Unc5-like netrin receptors
- cd12026
Location:517 → 581
- SH3_ZO-1; Src homology 3 domain of the Tight junction protein, Zonula occludens protein 1
- smart00072
Location:615 → 794
- GuKc; Guanylate kinase homologues
- smart00228
Location:183 → 263
- PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
- cd00992
Location:22 → 107
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- pfam00595
Location:425 → 501
- PDZ; PDZ domain (Also known as DHR or GLGF)
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000073.7 Reference GRCm39 C57BL/6J
- Range
-
64945913..65177629 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006540780.5 → XP_006540843.1 tight junction protein ZO-1 isoform X3
- Conserved Domains (7) summary
-
- cd12026
Location:610 → 674
- SH3_ZO-1; Src homology 3 domain of the Tight junction protein, Zonula occludens protein 1
- smart00072
Location:708 → 887
- GuKc; Guanylate kinase homologues
- smart00228
Location:276 → 356
- PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
- PHA03247
Location:1006 → 1688
- PHA03247; large tegument protein UL36; Provisional
- cd00992
Location:115 → 200
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- pfam00595
Location:518 → 594
- PDZ; PDZ domain (Also known as DHR or GLGF)
- pfam00791
Location:1725 → 1824
- ZU5; ZU5 domain
-
XM_006540778.5 → XP_006540841.1 tight junction protein ZO-1 isoform X1
- Conserved Domains (8) summary
-
- cd12026
Location:610 → 674
- SH3_ZO-1; Src homology 3 domain of the Tight junction protein, Zonula occludens protein 1
- smart00072
Location:708 → 887
- GuKc; Guanylate kinase homologues
- smart00228
Location:276 → 356
- PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
- PHA03247
Location:1006 → 1705
- PHA03247; large tegument protein UL36; Provisional
- PRK10263
Location:1227 → 1403
- PRK10263; DNA translocase FtsK; Provisional
- cd00992
Location:115 → 200
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- pfam00595
Location:518 → 594
- PDZ; PDZ domain (Also known as DHR or GLGF)
- pfam00791
Location:1742 → 1841
- ZU5; ZU5 domain
-
XM_006540785.5 → XP_006540848.1 tight junction protein ZO-1 isoform X9
- Conserved Domains (8) summary
-
- cd12026
Location:610 → 674
- SH3_ZO-1; Src homology 3 domain of the Tight junction protein, Zonula occludens protein 1
- smart00072
Location:708 → 887
- GuKc; Guanylate kinase homologues
- smart00228
Location:276 → 356
- PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
- PHA03247
Location:1235 → 1594
- PHA03247; large tegument protein UL36; Provisional
- PRK03427
Location:1163 → 1274
- PRK03427; cell division protein ZipA; Provisional
- cd00992
Location:115 → 200
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- pfam00595
Location:518 → 594
- PDZ; PDZ domain (Also known as DHR or GLGF)
- pfam00791
Location:1645 → 1744
- ZU5; ZU5 domain
-
XM_006540783.5 → XP_006540846.1 tight junction protein ZO-1 isoform X7
- Conserved Domains (8) summary
-
- cd12026
Location:610 → 674
- SH3_ZO-1; Src homology 3 domain of the Tight junction protein, Zonula occludens protein 1
- smart00072
Location:708 → 887
- GuKc; Guanylate kinase homologues
- smart00228
Location:276 → 356
- PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
- PHA03247
Location:1168 → 1655
- PHA03247; large tegument protein UL36; Provisional
- PRK10263
Location:1147 → 1323
- PRK10263; DNA translocase FtsK; Provisional
- cd00992
Location:115 → 200
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- pfam00595
Location:518 → 594
- PDZ; PDZ domain (Also known as DHR or GLGF)
- pfam00791
Location:1662 → 1761
- ZU5; ZU5 domain
-
XM_030242356.2 → XP_030098216.1 tight junction protein ZO-1 isoform X10
- Conserved Domains (8) summary
-
- cd12026
Location:505 → 569
- SH3_ZO-1; Src homology 3 domain of the Tight junction protein, Zonula occludens protein 1
- smart00072
Location:603 → 782
- GuKc; Guanylate kinase homologues
- smart00228
Location:171 → 251
- PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
- PHA03247
Location:901 → 1600
- PHA03247; large tegument protein UL36; Provisional
- PRK10263
Location:1122 → 1298
- PRK10263; DNA translocase FtsK; Provisional
- cd00992
Location:10 → 95
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- pfam00595
Location:413 → 489
- PDZ; PDZ domain (Also known as DHR or GLGF)
- pfam00791
Location:1637 → 1736
- ZU5; ZU5 domain
-
XM_036152893.1 → XP_036008786.1 tight junction protein ZO-1 isoform X14
- Conserved Domains (8) summary
-
- cd12026
Location:517 → 581
- SH3_ZO-1; Src homology 3 domain of the Tight junction protein, Zonula occludens protein 1
- smart00072
Location:615 → 794
- GuKc; Guanylate kinase homologues
- smart00228
Location:183 → 263
- PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
- PHA03247
Location:1075 → 1562
- PHA03247; large tegument protein UL36; Provisional
- PRK10263
Location:1054 → 1230
- PRK10263; DNA translocase FtsK; Provisional
- cd00992
Location:22 → 107
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- pfam00595
Location:425 → 501
- PDZ; PDZ domain (Also known as DHR or GLGF)
- pfam00791
Location:1569 → 1668
- ZU5; ZU5 domain
-
XM_006540784.5 → XP_006540847.1 tight junction protein ZO-1 isoform X8
- Conserved Domains (8) summary
-
- cd12026
Location:517 → 581
- SH3_ZO-1; Src homology 3 domain of the Tight junction protein, Zonula occludens protein 1
- smart00072
Location:615 → 794
- GuKc; Guanylate kinase homologues
- smart00228
Location:183 → 263
- PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
- PHA03247
Location:913 → 1612
- PHA03247; large tegument protein UL36; Provisional
- PRK10263
Location:1134 → 1310
- PRK10263; DNA translocase FtsK; Provisional
- cd00992
Location:22 → 107
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- pfam00595
Location:425 → 501
- PDZ; PDZ domain (Also known as DHR or GLGF)
- pfam00791
Location:1649 → 1748
- ZU5; ZU5 domain
-
XM_006540786.5 → XP_006540849.1 tight junction protein ZO-1 isoform X13
- Conserved Domains (8) summary
-
- smart00218
Location:1642 → 1748
- ZU5; Domain present in ZO-1 and Unc5-like netrin receptors
- cd12026
Location:610 → 674
- SH3_ZO-1; Src homology 3 domain of the Tight junction protein, Zonula occludens protein 1
- smart00072
Location:708 → 887
- GuKc; Guanylate kinase homologues
- smart00228
Location:276 → 356
- PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
- PHA03247
Location:1235 → 1594
- PHA03247; large tegument protein UL36; Provisional
- PRK03427
Location:1163 → 1274
- PRK03427; cell division protein ZipA; Provisional
- cd00992
Location:115 → 200
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- pfam00595
Location:518 → 594
- PDZ; PDZ domain (Also known as DHR or GLGF)
-
XM_036152892.1 → XP_036008785.1 tight junction protein ZO-1 isoform X12
- Conserved Domains (8) summary
-
- cd12026
Location:610 → 674
- SH3_ZO-1; Src homology 3 domain of the Tight junction protein, Zonula occludens protein 1
- smart00072
Location:708 → 887
- GuKc; Guanylate kinase homologues
- smart00228
Location:276 → 356
- PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
- PHA03247
Location:1235 → 1594
- PHA03247; large tegument protein UL36; Provisional
- PRK03427
Location:1163 → 1274
- PRK03427; cell division protein ZipA; Provisional
- cd00992
Location:115 → 200
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- pfam00595
Location:518 → 594
- PDZ; PDZ domain (Also known as DHR or GLGF)
- pfam00791
Location:1645 → 1734
- ZU5; ZU5 domain
-
XM_006540782.5 → XP_006540845.1 tight junction protein ZO-1 isoform X6
- Conserved Domains (7) summary
-
- smart00218
Location:1722 → 1828
- ZU5; Domain present in ZO-1 and Unc5-like netrin receptors
- cd12026
Location:610 → 674
- SH3_ZO-1; Src homology 3 domain of the Tight junction protein, Zonula occludens protein 1
- smart00072
Location:708 → 887
- GuKc; Guanylate kinase homologues
- smart00228
Location:276 → 356
- PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
- PHA03247
Location:1006 → 1688
- PHA03247; large tegument protein UL36; Provisional
- cd00992
Location:115 → 200
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- pfam00595
Location:518 → 594
- PDZ; PDZ domain (Also known as DHR or GLGF)
-
XM_011250843.4 → XP_011249145.1 tight junction protein ZO-1 isoform X5
- Conserved Domains (7) summary
-
- smart00218
Location:1722 → 1835
- ZU5; Domain present in ZO-1 and Unc5-like netrin receptors
- cd12026
Location:610 → 674
- SH3_ZO-1; Src homology 3 domain of the Tight junction protein, Zonula occludens protein 1
- smart00072
Location:708 → 887
- GuKc; Guanylate kinase homologues
- smart00228
Location:276 → 356
- PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
- PHA03247
Location:1006 → 1688
- PHA03247; large tegument protein UL36; Provisional
- cd00992
Location:115 → 200
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- pfam00595
Location:518 → 594
- PDZ; PDZ domain (Also known as DHR or GLGF)
-
XM_006540781.5 → XP_006540844.1 tight junction protein ZO-1 isoform X4
- Conserved Domains (8) summary
-
- smart00218
Location:1739 → 1845
- ZU5; Domain present in ZO-1 and Unc5-like netrin receptors
- cd12026
Location:610 → 674
- SH3_ZO-1; Src homology 3 domain of the Tight junction protein, Zonula occludens protein 1
- smart00072
Location:708 → 887
- GuKc; Guanylate kinase homologues
- smart00228
Location:276 → 356
- PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
- PHA03247
Location:1006 → 1705
- PHA03247; large tegument protein UL36; Provisional
- PRK10263
Location:1227 → 1403
- PRK10263; DNA translocase FtsK; Provisional
- cd00992
Location:115 → 200
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- pfam00595
Location:518 → 594
- PDZ; PDZ domain (Also known as DHR or GLGF)
-
XM_006540779.5 → XP_006540842.1 tight junction protein ZO-1 isoform X2
- Conserved Domains (8) summary
-
- smart00218
Location:1739 → 1852
- ZU5; Domain present in ZO-1 and Unc5-like netrin receptors
- cd12026
Location:610 → 674
- SH3_ZO-1; Src homology 3 domain of the Tight junction protein, Zonula occludens protein 1
- smart00072
Location:708 → 887
- GuKc; Guanylate kinase homologues
- smart00228
Location:276 → 356
- PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
- PHA03247
Location:1006 → 1705
- PHA03247; large tegument protein UL36; Provisional
- PRK10263
Location:1227 → 1403
- PRK10263; DNA translocase FtsK; Provisional
- cd00992
Location:115 → 200
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- pfam00595
Location:518 → 594
- PDZ; PDZ domain (Also known as DHR or GLGF)