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    Nucleoside diphosphate kinase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838313, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Nucleoside diphosphate kinase family protein
    Primary source
    TAIR:AT1G17410
    Locus tag
    AT1G17410
    See related
    Araport:AT1G17410
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F28G4.12; F28G4_12
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    5
    Sequence:
    Chromosome: 1; NC_003070.9 (5968410..5969995, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene lipoxygenase 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001198092.2
    NM_001332304.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables nucleoside diphosphate kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in CTP biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in GTP biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in UTP biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Nucleoside diphosphate kinase family protein
    NP_001185021.1
    • Nucleoside diphosphate kinase family protein; FUNCTIONS IN: nucleoside diphosphate kinase activity, ATP binding; INVOLVED IN: UTP biosynthetic process, GTP biosynthetic process, CTP biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside diphosphate kinase, core (InterPro:IPR001564); BEST Arabidopsis thaliana protein match is: nucleoside diphosphate kinase 2 (TAIR:AT5G63310.1).
    NP_173184.2
    • Nucleoside diphosphate kinase family protein; FUNCTIONS IN: nucleoside diphosphate kinase activity, ATP binding; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside diphosphate kinase, core (InterPro:IPR001564); BEST Arabidopsis thaliana protein match is: nucleoside diphosphate kinase 2 (TAIR:AT5G63310.1); Has 9030 Blast hits to 8806 proteins in 2558 species: Archae - 289; Bacteria - 4566; Metazoa - 1151; Fungi - 165; Plants - 382; Viruses - 117; Other Eukaryotes - 2360 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      5968410..5969995 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_101602.4 → NP_173184.2  Nucleoside diphosphate kinase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_173184.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9UVJ5, A0A654EBP7, A0A7G2DTH8, F4I7J3
      Conserved Domains (1) summary
      PLN02931
      Location:1 → 181
      PLN02931; nucleoside diphosphate kinase family protein

    2. NM_001198092.2 → NP_001185021.1  Nucleoside diphosphate kinase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001185021.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q6NLG3, Q9LQJ3
      UniProtKB/TrEMBL
      A0A178WMZ5
      Conserved Domains (1) summary
      cl00335
      Location:1 → 144
      NDPk; Nucleoside diphosphate kinases (NDP kinases, NDPks): NDP kinases, responsible for the synthesis of nucleoside triphosphates (NTPs), are involved in numerous regulatory processes associated with proliferation, development, and differentiation. They are ...

    3. NM_001332304.1 → NP_001323378.1  Nucleoside diphosphate kinase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AWY6
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q6NLG3.1

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