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    Nucleotide-diphospho-sugar transferase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843400, updated on 18-Sep-2024

    Summary

    Official Full Name
    Nucleotide-diphospho-sugar transferase family protein
    Primary source
    TAIR:AT1G70630
    Locus tag
    AT1G70630
    See related
    Araport:AT1G70630
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F24J13.20; F24J13_20; RAY1; REDUCED ARABINOSE YARIV 1
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    Genomic context

    Location:
    chromosome: 1
    Exon count:
    5
    Sequence:
    Chromosome: 1; NC_003070.9 (26631112..26634259)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene transporter associated with antigen processing protein 1 Neighboring gene cyclin-like protein Neighboring gene octicosapeptide/Phox/Bem1p (PB1) domain-containing protein Neighboring gene Ran BP2/NZF zinc finger-like superfamily protein Neighboring gene microRNA ath-MIR777 precursor

    General gene information

    NM_001334473.1
    NM_001334474.1
    NM_001334475.1
    NM_105731.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables glycosyltransferase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables glycosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within cell wall biogenesis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
     
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
     

    General protein information

    Preferred Names
    Nucleotide-diphospho-sugar transferase family protein
    NP_177220.2
    • Nucleotide-diphospho-sugar transferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388), Nucleotide-diphospho-sugar transferase, predicted (InterPro:IPR005069); BEST Arabidopsis thaliana protein match is: xyloglucanase 113 (TAIR:AT2G35610.1); Has 427 Blast hits to 427 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 379; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      26631112..26634259
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001334470.1NP_001322086.1  Nucleotide-diphospho-sugar transferase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4I6V0, Q9S7C7
    2. NM_001334471.1NP_001322081.1  Nucleotide-diphospho-sugar transferase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8ASV0, A0A5S9WRD3
    3. NM_001334472.1NP_001322082.1  Nucleotide-diphospho-sugar transferase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8ASZ1, A0A5S9WRD3
    4. NM_105731.4NP_177220.2  Nucleotide-diphospho-sugar transferase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177220.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4I6V0, Q9S7C7
      Conserved Domains (1) summary
      pfam03407
      Location:298520
      Nucleotid_trans; Nucleotide-diphospho-sugar transferase
    5. NM_001334473.1NP_001322083.1  Nucleotide-diphospho-sugar transferase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8ASW5
    6. NM_001334474.1NP_001322084.1  Nucleotide-diphospho-sugar transferase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AT04, A0A5S9WRD3
    7. NM_001334475.1NP_001322085.1  Nucleotide-diphospho-sugar transferase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WK09, A0A1P8ASW3