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    ABCI17 non-intrinsic ABC protein 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843122, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ABCI17
    Official Full Name
    non-intrinsic ABC protein 3
    Primary source
    TAIR:AT1G67940
    Locus tag
    AT1G67940
    See related
    Araport:AT1G67940
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ARABIDOPSIS THALIANA NON-INTRINSIC ABC PROTEIN 3; ATNAP3; ATP-binding cassette I17; AtSTAR1; non-intrinsic ABC protein 3; T23K23.21; T23K23_21
    Summary
    member of NAP subfamily
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    Genomic context

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    See ABCI17 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (25477670..25478803)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Golgi transport complex protein-like protein Neighboring gene RNA-binding (RRM/RBD/RNP motifs) family protein Neighboring gene ncRNA Neighboring gene POLLEN DEFECTIVE IN GUIDANCE-like protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Knockout of a bacterial-type ATP-binding cassette transporter gene, AtSTAR1, results in increased aluminum sensitivity in Arabidopsis. Huang CF, et al. Plant Physiol, 2010 Aug. PMID 20498340, Free PMC Article
    2. An ABC transporter complex encoded by Aluminum Sensitive 3 and NAP3 is required for phosphate deficiency responses in Arabidopsis. Belal R, et al. Biochem Biophys Res Commun, 2015 Jul 17-24. PMID 25983320
    3. The Arabidopsis thaliana ABC protein superfamily, a complete inventory. Sánchez-Fernández R, et al. J Biol Chem, 2001 Aug 10. PMID 11346655
    4. A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. Jaquinod M, et al. Mol Cell Proteomics, 2007 Mar. PMID 17151019, Free PMC Article
    5. A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome. Marmagne A, et al. Mol Cell Proteomics, 2007 Nov. PMID 17644812

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. ALS3 and NAP3 protein form an ABC transporter complex that is required for sugar-dependent response to phosphate deficiency.
      Title: An ABC transporter complex encoded by Aluminum Sensitive 3 and NAP3 is required for phosphate deficiency responses in Arabidopsis.
    2. AtSTAR1, sensitive to Al rhizotoxicity, is required for aluminum tolerance. [STAR1]
      Title: Knockout of a bacterial-type ATP-binding cassette transporter gene, AtSTAR1, results in increased aluminum sensitivity in Arabidopsis.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_105464.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables phosphate transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables transmembrane transporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in phosphate ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in plant-type vacuole HDA PubMed 
    located_in plasma membrane HDA PubMed 
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    non-intrinsic ABC protein 3
    NP_176961.1
    • non-intrinsic ABC protein 3 (NAP3); FUNCTIONS IN: transporter activity; INVOLVED IN: phosphate transport; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate transport system permease protein 1 (InterPro:IPR005670), ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 7 (TAIR:AT5G46540.1); Has 422748 Blast hits to 381356 proteins in 3991 species: Archae - 7530; Bacteria - 326504; Metazoa - 9961; Fungi - 7250; Plants - 4967; Viruses - 18; Other Eukaryotes - 66518 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      25477670..25478803
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105464.3 → NP_176961.1  non-intrinsic ABC protein 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_176961.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9C9W0
      UniProtKB/TrEMBL
      A0A178WE46, A0A384LP62, D6RVY5
      Conserved Domains (1) summary
      cd03260
      Location:29 → 247
      ABC_PstB_phosphate_transporter; ATP-binding cassette domain of the phosphate transport system
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9C9W0.1

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