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    CCR1 CRINKLY4 related 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820136, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CCR1
    Official Full Name
    CRINKLY4 related 1
    Primary source
    TAIR:AT3G09780
    Locus tag
    AT3G09780
    See related
    Araport:AT3G09780
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATCRR1; CRINKLY4 related 1; X
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    Genomic context

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    See CCR1 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    1
    Sequence:
    Chromosome: 3; NC_003074.8 (3000714..3003454, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Galactose oxidase/kelch repeat superfamily protein Neighboring gene RING/U-box superfamily protein Neighboring gene RING/U-box superfamily protein Neighboring gene ubiquitin 8 Neighboring gene SNARE-like superfamily protein Neighboring gene isocitrate dehydrogenase VI

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Impact of CCR1 silencing on the assembly of lignified secondary walls in Arabidopsis thaliana. Ruel K, et al. New Phytol, 2009. PMID 19674336
    2. Molecular analysis of the CRINKLY4 gene family in Arabidopsis thaliana. Cao X, et al. Planta, 2005 Mar. PMID 15549374
    3. Dimerization properties of the transmembrane domains of Arabidopsis CRINKLY4 receptor-like kinase and homologs. Stokes KD, et al. Arch Biochem Biophys, 2008 Sep 15. PMID 18539132
    4. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_111813.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein homodimerization activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables protein kinase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    CRINKLY4 related 1
    NP_187589.1
    • CRINKLY4 related 1 (CCR1); FUNCTIONS IN: protein serine/threonine kinase activity, receptor activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: TNFR/CD27/30/40/95 cysteine-rich region (InterPro:IPR001368), Protein kinase, ATP binding site (InterPro:IPR017441), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: CRINKLY4 related 2 (TAIR:AT2G39180.1); Has 92283 Blast hits to 90862 proteins in 3897 species: Archae - 88; Bacteria - 8648; Metazoa - 34704; Fungi - 6843; Plants - 29398; Viruses - 212; Other Eukaryotes - 12390 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      3000714..3003454 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_111813.4 → NP_187589.1  CRINKLY4 related 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_187589.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9S7D9
      UniProtKB/TrEMBL
      A0A178VGA2, A0A5S9XAU8, A0A7G2EMM8
      Conserved Domains (1) summary
      cl21453
      Location:526 → 766
      PKc_like; Protein Kinases, catalytic domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9S7D9.1

    Gene LinkOut

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