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    PIP5K9 phosphatidyl inositol monophosphate 5 kinase [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820151, updated on 18-Sep-2024

    Summary

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    Official Symbol
    PIP5K9
    Official Full Name
    phosphatidyl inositol monophosphate 5 kinase
    Primary source
    TAIR:AT3G09920
    Locus tag
    AT3G09920
    See related
    Araport:AT3G09920
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    phosphatidyl inositol monophosphate 5 kinase
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    Genomic context

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    See PIP5K9 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    10
    Sequence:
    Chromosome: 3; NC_003074.8 (3038780..3044989, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Ankyrin repeat family protein Neighboring gene RAB GTPase homolog E1E Neighboring gene RAB GTPase homolog C2B Neighboring gene miscRNA Neighboring gene Pollen Ole e 1 allergen and extensin family protein Neighboring gene induced by phosphate starvation1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Lipid kinases PIP5K7 and PIP5K9 are required for polyamine-triggered K(+) efflux in Arabidopsis roots. Zarza X, et al. Plant J, 2020 Oct. PMID 32666545, Free PMC Article
    2. PIP5K9, an Arabidopsis phosphatidylinositol monophosphate kinase, interacts with a cytosolic invertase to negatively regulate sugar-mediated root growth. Lou Y, et al. Plant Cell, 2007 Jan. PMID 17220200, Free PMC Article
    3. The Arabidopsis Phosphatidylinositol Phosphate 5-Kinase PIP5K3 is a key regulator of root hair tip growth. Kusano H, et al. Plant Cell, 2008 Feb. PMID 18281506, Free PMC Article
    4. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Lipid kinases PIP5K7 and PIP5K9 are required for polyamine-triggered K(+) efflux in Arabidopsis roots.
      Title: Lipid kinases PIP5K7 and PIP5K9 are required for polyamine-triggered K(+) efflux in Arabidopsis roots.
    2. PIP5K9 interacts with CINV1 to negatively regulate sugar-mediated root cell elongation.
      Title: PIP5K9, an Arabidopsis phosphatidylinositol monophosphate kinase, interacts with a cytosolic invertase to negatively regulate sugar-mediated root growth.
    Submit: New GeneRIF Correction

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001035589.3
    NM_001202923.1
    NM_001337850.1
    NM_111827.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables 1-phosphatidylinositol-4-phosphate 5-kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within amino acid metabolic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within carbohydrate metabolic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in phosphatidylinositol metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    phosphatidyl inositol monophosphate 5 kinase
    NP_001030666.1
    • phosphatidyl inositol monophosphate 5 kinase (PIP5K9); FUNCTIONS IN: 1-phosphatidylinositol-4-phosphate 5-kinase activity, phosphatidylinositol phosphate kinase activity, ATP binding; INVOLVED IN: carbohydrate metabolic process, cellular amino acid metabolic process; LOCATED IN: cytosol, nucleus, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Phosphatidylinositol-4-phosphate 5-kinase, plant (InterPro:IPR017163), MORN motif (InterPro:IPR003409), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol-4-phosphate 5-kinase family protein (TAIR:AT1G60890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_001189852.1
    • phosphatidyl inositol monophosphate 5 kinase (PIP5K9); FUNCTIONS IN: 1-phosphatidylinositol-4-phosphate 5-kinase activity, phosphatidylinositol phosphate kinase activity, ATP binding; INVOLVED IN: carbohydrate metabolic process, cellular amino acid metabolic process; LOCATED IN: cytosol, nucleus, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Phosphatidylinositol-4-phosphate 5-kinase, plant (InterPro:IPR017163), MORN motif (InterPro:IPR003409), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol-4-phosphate 5-kinase family protein (TAIR:AT1G60890.1).
    NP_187603.1
    • phosphatidyl inositol monophosphate 5 kinase (PIP5K9); FUNCTIONS IN: 1-phosphatidylinositol-4-phosphate 5-kinase activity, phosphatidylinositol phosphate kinase activity, ATP binding; INVOLVED IN: carbohydrate metabolic process, cellular amino acid metabolic process; LOCATED IN: cytosol, nucleus, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Phosphatidylinositol-4-phosphate 5-kinase, plant (InterPro:IPR017163), MORN motif (InterPro:IPR003409), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol-4-phosphate 5-kinase family protein (TAIR:AT1G60890.1); Has 25974 Blast hits to 7709 proteins in 605 species: Archae - 0; Bacteria - 3692; Metazoa - 3999; Fungi - 475; Plants - 1866; Viruses - 0; Other Eukaryotes - 15942 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      3038780..3044989 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001202923.1 → NP_001189852.1  phosphatidyl inositol monophosphate 5 kinase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001189852.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q0WMK5, Q8L850, Q9SF93
      UniProtKB/TrEMBL
      A0A5S9XAU0, A0A654FG69
      Conserved Domains (1) summary
      PLN03185
      Location:48 → 810
      PLN03185; phosphatidylinositol phosphate kinase; Provisional

    2. NM_001337850.1 → NP_001327647.1  phosphatidyl inositol monophosphate 5 kinase [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q0WMK5, Q8L850, Q9SF93
      UniProtKB/TrEMBL
      A0A5S9XAU0, A0A654FG69
      Conserved Domains (1) summary
      PLN03185
      Location:48 → 810
      PLN03185; phosphatidylinositol phosphate kinase; Provisional

    3. NM_001035589.3 → NP_001030666.1  phosphatidyl inositol monophosphate 5 kinase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001030666.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q0WMK5, Q8L850, Q9SF93
      UniProtKB/TrEMBL
      A0A5S9XAU0, A0A654FG69
      Conserved Domains (1) summary
      PLN03185
      Location:48 → 810
      PLN03185; phosphatidylinositol phosphate kinase; Provisional

    4. NM_111827.3 → NP_187603.1  phosphatidyl inositol monophosphate 5 kinase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_187603.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q0WMK5, Q8L850, Q9SF93
      UniProtKB/TrEMBL
      A0A5S9XAU0, A0A654FG69
      Conserved Domains (1) summary
      PLN03185
      Location:48 → 810
      PLN03185; phosphatidylinositol phosphate kinase; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8L850.2

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