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    TET7 tetraspanin7 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828920, updated on 18-Sep-2024

    Summary

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    Official Symbol
    TET7
    Official Full Name
    tetraspanin7
    Primary source
    TAIR:AT4G28050
    Locus tag
    AT4G28050
    See related
    Araport:AT4G28050
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T13J8.160; T13J8_160; tetraspanin7
    Summary
    Member of TETRASPANIN family
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    Genomic context

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    See TET7 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    2
    Sequence:
    Chromosome: 4; NC_003075.7 (13942257..13943732, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Acyl-CoA N-acyltransferases (NAT) superfamily protein Neighboring gene nodulin MtN21 /EamA-like transporter family protein Neighboring gene Cytochrome c oxidase, subunit Vib family protein Neighboring gene uncharacterized protein Neighboring gene AFG1-like ATPase family protein Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis Tetraspanins Facilitate Virus Infection via Membrane-Recognition GCCK/RP Motif and Cysteine Residues. Zhu T, et al. Front Plant Sci, 2022. PMID 35310653, Free PMC Article
    2. Arabidopsis plasmodesmal proteome. Fernandez-Calvino L, et al. PLoS One, 2011 Apr 20. PMID 21533090, Free PMC Article
    3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_118944.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in auxin-activated signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasmodesma HDA PubMed 

    General protein information

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    Preferred Names
    tetraspanin7
    NP_194534.1
    • tetraspanin7 (TET7); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: aging; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetraspanin (InterPro:IPR018499), Tetraspanin, conserved site (InterPro:IPR018503), Tetraspanin, subgroup (InterPro:IPR000301); BEST Arabidopsis thaliana protein match is: tetraspanin8 (TAIR:AT2G23810.1); Has 591 Blast hits to 589 proteins in 60 species: Archae - 0; Bacteria - 0; Metazoa - 150; Fungi - 0; Plants - 430; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      13942257..13943732 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118944.3 → NP_194534.1  tetraspanin7 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194534.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SUD4
      UniProtKB/TrEMBL
      A0A178V1Y2, A0A5S9XWJ6, A0A7G2F485
      Conserved Domains (1) summary
      pfam00335
      Location:5 → 253
      Tetraspannin; Tetraspanin family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SUD4.1

    Gene LinkOut

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