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    PEX11E peroxin 11E [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 825279, updated on 18-Sep-2024

    Summary

    Official Symbol
    PEX11E
    Official Full Name
    peroxin 11E
    Primary source
    TAIR:AT3G61070
    Locus tag
    AT3G61070
    See related
    Araport:AT3G61070
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    peroxin 11E
    Summary
    member of the peroxin11 (PEX11) gene family, integral to peroxisome membrane, controls peroxisome proliferation.
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    Genomic context

    See PEX11E in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    8
    Sequence:
    Chromosome: 3; NC_003074.8 (22604094..22606878, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene cytochrome P450, family 76, subfamily C, polypeptide 7 Neighboring gene Calcium-dependent lipid-binding (CaLB domain) family protein Neighboring gene phloem protein 2-A13 Neighboring gene Protein kinase superfamily protein Neighboring gene Putative endonuclease or glycosyl hydrolase Neighboring gene Putative endonuclease or glycosyl hydrolase

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    NM_001084853.2
    NM_001203220.1
    NM_115971.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables identical protein binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within circadian rhythm IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    acts_upstream_of_or_within peroxisome fission IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within peroxisome organization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 

    General protein information

    Preferred Names
    peroxin 11E
    NP_001078322.1
    • peroxin 11E (PEX11E); CONTAINS InterPro DOMAIN/s: Peroxisomal biogenesis factor 11 (InterPro:IPR008733); BEST Arabidopsis thaliana protein match is: peroxin 11D (TAIR:AT2G45740.3); Has 282 Blast hits to 282 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 49; Fungi - 35; Plants - 180; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink).
    NP_001190149.1
    • peroxin 11E (PEX11E); CONTAINS InterPro DOMAIN/s: Peroxisomal biogenesis factor 11 (InterPro:IPR008733); BEST Arabidopsis thaliana protein match is: peroxin 11D (TAIR:AT2G45740.3).
    NP_191666.2
    • peroxin 11E (PEX11E); INVOLVED IN: response to light stimulus, peroxisome fission, peroxisome organization; LOCATED IN: mitochondrion, peroxisomal membrane, integral to peroxisomal membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peroxisomal biogenesis factor 11 (InterPro:IPR008733); BEST Arabidopsis thaliana protein match is: peroxin 11D (TAIR:AT2G45740.3); Has 282 Blast hits to 282 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 49; Fungi - 35; Plants - 180; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      22604094..22606878 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001203220.1NP_001190149.1  peroxin 11E [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190149.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q5QT11, Q84JW1, Q9LEW9
      UniProtKB/TrEMBL
      A0A178VG67, A0A5S9XPE9
      Conserved Domains (1) summary
      pfam05648
      Location:11222
      PEX11; Peroxisomal biogenesis factor 11 (PEX11)
    2. NM_001084853.2NP_001078322.1  peroxin 11E [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001078322.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q5QT11, Q84JW1, Q9LEW9
      UniProtKB/TrEMBL
      A0A178VG67, A0A5S9XPE9
      Conserved Domains (1) summary
      pfam05648
      Location:11222
      PEX11; Peroxisomal biogenesis factor 11 (PEX11)
    3. NM_115971.3NP_191666.2  peroxin 11E [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_191666.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q5QT11, Q84JW1, Q9LEW9
      UniProtKB/TrEMBL
      A0A178VG67, A0A5S9XPE9
      Conserved Domains (1) summary
      pfam05648
      Location:11222
      PEX11; Peroxisomal biogenesis factor 11 (PEX11)