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    PLAC8 family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 830417, updated on 18-Sep-2024

    Summary

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    Official Full Name
    PLAC8 family protein
    Primary source
    TAIR:AT5G05350
    Locus tag
    AT5G05350
    See related
    Araport:AT5G05350
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    K18I23.15; K18I23_15
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    1
    Sequence:
    Chromosome: 5; NC_003076.8 (1585249..1587517)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene HMG-box (high mobility group) DNA-binding family protein Neighboring gene Peroxidase superfamily protein Neighboring gene uncharacterized protein Neighboring gene Heavy metal transport/detoxification superfamily protein Neighboring gene Cytochrome b-c1 complex, subunit 8 protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_120617.3

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    PLAC8 family protein
    NP_196154.1
    • PLAC8 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461), Protein of unknown function DUF2985 (InterPro:IPR021369); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT3G10980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      1585249..1587517
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_120617.3 → NP_196154.1  PLAC8 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_196154.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9Y1K9, Q5XV52
      Conserved Domains (2) summary
      TIGR01571
      Location:305 → 441
      A_thal_Cys_rich; uncharacterized Cys-rich domain
      pfam11204
      Location:101 → 178
      DUF2985; Protein of unknown function (DUF2985)
    Nucleotide Protein
    Heading Accession and Version

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