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    WRKY72 WRKY DNA-binding protein 72 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 831365, updated on 18-Sep-2024

    Summary

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    Official Symbol
    WRKY72
    Official Full Name
    WRKY DNA-binding protein 72
    Primary source
    TAIR:AT5G15130
    Locus tag
    AT5G15130
    See related
    Araport:AT5G15130
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 72; ATWRKY72; F8M21.20; F8M21_20; WRKY DNA-binding protein 72
    Summary
    member of WRKY Transcription Factor; Group II-b; contribute to basal immunity.
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    Genomic context

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    See WRKY72 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    4
    Sequence:
    Chromosome: 5; NC_003076.8 (4904290..4907094)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Pectate lyase family protein Neighboring gene 2-aminoethanethiol dioxygenase, putative (DUF1637) Neighboring gene Galactose mutarotase-like superfamily protein Neighboring gene homeobox 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. WRKY72-type transcription factors contribute to basal immunity in tomato and Arabidopsis as well as gene-for-gene resistance mediated by the tomato R gene Mi-1. Bhattarai KK, et al. Plant J, 2010 Jul. PMID 20409007
    2. The WRKY superfamily of plant transcription factors. Eulgem T, et al. Trends Plant Sci, 2000 May. PMID 10785665
    3. Profiling of the Receptor for Activated C Kinase 1a (RACK1a) interaction network in Arabidopsis thaliana. Guo J, et al. Biochem Biophys Res Commun, 2019 Dec 3. PMID 31606202
    4. MAPK target networks in Arabidopsis thaliana revealed using functional protein microarrays. Popescu SC, et al. Genes Dev, 2009 Jan 1. PMID 19095804, Free PMC Article
    5. Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. Riechmann JL, et al. Science, 2000 Dec 15. PMID 11118137

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001343389.1
    NM_121517.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within defense response IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    WRKY DNA-binding protein 72
    NP_197017.1
    • WRKY DNA-binding protein 72 (WRKY72); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 61 (TAIR:AT1G18860.1); Has 6758 Blast hits to 4151 proteins in 378 species: Archae - 0; Bacteria - 669; Metazoa - 395; Fungi - 387; Plants - 3478; Viruses - 9; Other Eukaryotes - 1820 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      4904290..4907094
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_121517.3 → NP_197017.1  WRKY DNA-binding protein 72 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_197017.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8GYQ6, Q9LXG8
      UniProtKB/TrEMBL
      A0A5S9Y4K7
      Conserved Domains (1) summary
      smart00774
      Location:227 → 284
      WRKY; DNA binding domain

    2. NM_001343389.1 → NP_001331284.1  WRKY DNA-binding protein 72 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BDI5, A0A5S9Y4K7, A0A7G2FCP8
      Conserved Domains (1) summary
      smart00774
      Location:185 → 242
      WRKY; DNA binding domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LXG8.1

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