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    SMAD/FHA domain-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 834830, updated on 18-Sep-2024

    Summary

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    Official Full Name
    SMAD/FHA domain-containing protein
    Primary source
    TAIR:AT5G47790
    Locus tag
    AT5G47790
    See related
    Araport:AT5G47790
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MCA23.11; MCA23_11
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    2
    Sequence:
    Chromosome: 5; NC_003076.8 (19351292..19353495)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene 2-phosphoglycolate phosphatase 2 Neighboring gene farnesyl diphosphate synthase 1 Neighboring gene galacturonosyltransferase 4 Neighboring gene miscRNA Neighboring gene Phototropic-responsive NPH3 family protein Neighboring gene phosphofructokinase 2 Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Extensive signal integration by the phytohormone protein network. Altmann M, et al. Nature, 2020 Jul. PMID 32612234
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_124153.6

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    SMAD/FHA domain-containing protein
    NP_199590.1
    • SMAD/FHA domain-containing protein; CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Forkhead-associated (FHA) domain (InterPro:IPR000253); BEST Arabidopsis thaliana protein match is: SMAD/FHA domain-containing protein (TAIR:AT5G38840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      19351292..19353495
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_124153.6 → NP_199590.1  SMAD/FHA domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_199590.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FIK2
      UniProtKB/TrEMBL
      A0A178UI90, A0A5S9YC43
      Conserved Domains (1) summary
      cd00060
      Location:65 → 154
      FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FIK2.1

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