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    ATPase, V0 complex, subunit E [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 835622, updated on 18-Sep-2024

    Summary

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    Official Full Name
    ATPase, V0 complex, subunit E
    Primary source
    TAIR:AT5G55290
    Locus tag
    AT5G55290
    See related
    Araport:AT5G55290
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MCO15.24; MCO15_24
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    4
    Sequence:
    Chromosome: 5; NC_003076.8 (22422673..22424380, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene hypothetical protein (DUF295) Neighboring gene homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1 Neighboring gene DNA topoisomerase I alpha Neighboring gene DNA topoisomerase 1 beta

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Isolation of intact vacuoles and proteomic analysis of tonoplast from suspension-cultured cells of Arabidopsis thaliana. Shimaoka T, et al. Plant Cell Physiol, 2004 Jun. PMID 15215502
    2. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001161309.2
    NM_124911.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables proton-transporting ATPase activity, rotational mechanism IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of proton-transporting V-type ATPase, V0 domain IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in vacuole HDA PubMed 

    General protein information

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    Preferred Names
    ATPase, V0 complex, subunit E
    NP_001154781.1
    • ATPase, V0 complex, subunit E; FUNCTIONS IN: hydrogen ion transmembrane transporter activity; INVOLVED IN: ATP hydrolysis coupled proton transport; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V0 complex, subunit E (InterPro:IPR008389); BEST Arabidopsis thaliana protein match is: ATPase, V0 complex, subunit E (TAIR:AT4G26710.2); Has 270 Blast hits to 270 proteins in 94 species: Archae - 0; Bacteria - 0; Metazoa - 171; Fungi - 14; Plants - 67; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink).
    NP_568823.1
    • ATPase, V0 complex, subunit E; FUNCTIONS IN: hydrogen ion transmembrane transporter activity; INVOLVED IN: ATP hydrolysis coupled proton transport; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V0 complex, subunit E (InterPro:IPR008389); BEST Arabidopsis thaliana protein match is: ATPase, V0 complex, subunit E (TAIR:AT4G26710.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      22422673..22424380 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001345122.1 → NP_001332693.1  ATPase, V0 complex, subunit E [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FLN5
      UniProtKB/TrEMBL
      A0A178UKT6, A0A5S9YFC7
      Conserved Domains (1) summary
      pfam05493
      Location:2 → 65
      ATP_synt_H; ATP synthase subunit H

    2. NM_001161309.2 → NP_001154781.1  ATPase, V0 complex, subunit E [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001154781.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FLN5
      UniProtKB/TrEMBL
      A0A178UKT6, A0A5S9YFC7
      Conserved Domains (1) summary
      pfam05493
      Location:2 → 65
      ATP_synt_H; ATP synthase subunit H

    3. NM_124911.5 → NP_568823.1  ATPase, V0 complex, subunit E [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568823.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FLN5
      UniProtKB/TrEMBL
      A0A178UKT6, A0A5S9YFC7
      Conserved Domains (1) summary
      pfam05493
      Location:2 → 65
      ATP_synt_H; ATP synthase subunit H
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FLN5.1

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