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    LBD37 LOB domain-containing protein 37 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 836878, updated on 18-Sep-2024

    Summary

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    Official Symbol
    LBD37
    Official Full Name
    LOB domain-containing protein 37
    Primary source
    TAIR:AT5G67420
    Locus tag
    AT5G67420
    See related
    Araport:AT5G67420
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ASL39; ASYMMETRIC LEAVES2-LIKE 39; K8K14.16; K8K14_16; LOB domain-containing protein 37
    Summary
    Encodes a LOB-domain protein involved in nitrogen metabolism and affecting leaf morphogenesis.
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    Genomic context

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    See LBD37 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    2
    Sequence:
    Chromosome: 5; NC_003076.8 (26903866..26906524, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene root hair specific 19 Neighboring gene transcriptional regulator of RNA polII, SAGA, subunit Neighboring gene GRAS family transcription factor Neighboring gene ncRNA Neighboring gene Acyl-CoA N-acyltransferases (NAT) superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Metabolomic screening applied to rice FOX Arabidopsis lines leads to the identification of a gene-changing nitrogen metabolism. Albinsky D, et al. Mol Plant, 2010 Jan. PMID 20085895
    2. ZmMS1/ZmLBD30-orchestrated transcriptional regulatory networks precisely control pollen exine development. Hou Q, et al. Mol Plant, 2023 Aug 7. PMID 37501369
    3. The TOPLESS interactome: a framework for gene repression in Arabidopsis. Causier B, et al. Plant Physiol, 2012 Jan. PMID 22065421, Free PMC Article
    4. Transcriptional regulation of nitrogen-associated metabolism and growth. Gaudinier A, et al. Nature, 2018 Nov. PMID 30356219
    5. MAPK target networks in Arabidopsis thaliana revealed using functional protein microarrays. Popescu SC, et al. Genes Dev, 2009 Jan 1. PMID 19095804, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001345828.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA-binding transcription repressor activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables transcription cis-regulatory region binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within simple leaf morphogenesis IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    LOB domain-containing protein 37
    NP_001318897.1
    • LOB domain-containing protein 37 (LBD37); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 38 (TAIR:AT3G49940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      26903866..26906524 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_126142.5 → NP_201543.1  LOB domain-containing protein 37 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_201543.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      B7XG93, Q2HIV4, Q8LA66, Q9FN11
      UniProtKB/TrEMBL
      A0A178UGV8, A0A5S9YID1
      Conserved Domains (1) summary
      pfam03195
      Location:2 → 102
      LOB; Lateral organ boundaries (LOB) domain

    2. NM_001345828.1 → NP_001318897.1  LOB domain-containing protein 37 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      B7XG93, Q2HIV4, Q8LA66, Q9FN11
      UniProtKB/TrEMBL
      A0A178UGV8, A0A5S9YID1
      Conserved Domains (1) summary
      pfam03195
      Location:2 → 102
      LOB; Lateral organ boundaries (LOB) domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FN11.1

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