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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_051931.1 RefSeqGene
- Range
-
5115..190825
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001289987.3 → NP_001276916.1 filamin-A-interacting protein 1 isoform 1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (1).
- Source sequence(s)
-
BC136444, BX647178, DB126435
- UniProtKB/TrEMBL
-
A8K2G7
- Conserved Domains (4) summary
-
- PRK03918
Location:208 → 741
- PRK03918; chromosome segregation protein; Provisional
- pfam06156
Location:389 → 461
- DUF972; Protein of unknown function (DUF972)
- pfam09727
Location:77 → 258
- CortBP2; Cortactin-binding protein-2
- cl23720
Location:428 → 532
- RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)
-
NM_001300866.3 → NP_001287795.1 filamin-A-interacting protein 1 isoform 3
See identical proteins and their annotated locations for NP_001287795.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) has multiple differences compared to variant 1. The encoded protein (isoform 3) has a shorter N-terminus and a shorter, distinct C-terminus, compared to isoform 1.
- Source sequence(s)
-
AL080250, AL832009, BC042026, BC136443, DB126435, KF458209
- Consensus CDS
-
CCDS75480.1
- UniProtKB/TrEMBL
-
A8K2G7
- Related
- ENSP00000376728.1, ENST00000393004.6
- Conserved Domains (4) summary
-
- PRK03918
Location:205 → 738
- PRK03918; chromosome segregation protein; Provisional
- pfam06156
Location:386 → 458
- DUF972; Protein of unknown function (DUF972)
- pfam09727
Location:74 → 255
- CortBP2; Cortactin-binding protein-2
- cl23720
Location:425 → 529
- RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)
-
NM_015687.5 → NP_056502.1 filamin-A-interacting protein 1 isoform 2
See identical proteins and their annotated locations for NP_056502.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks a 5' exon, lacks a portion of the 5' coding region, and initiates translation at a downstream start codon, compared to variant 1. The encoded protein (isoform 2) has a shorter N-terminus, compared to isoform 1.
- Source sequence(s)
-
BC136443, BX647178, DB126435
- Consensus CDS
-
CCDS4984.1
- UniProtKB/Swiss-Prot
- B2RMU6, Q5VUL6, Q7Z7B0, Q86TC3, Q8N8B9, Q96SK6, Q9NVI8, Q9ULE5
- UniProtKB/TrEMBL
-
A8K2G7
- Related
- ENSP00000237172.7, ENST00000237172.12
- Conserved Domains (4) summary
-
- PRK03918
Location:205 → 738
- PRK03918; chromosome segregation protein; Provisional
- pfam06156
Location:386 → 458
- DUF972; Protein of unknown function (DUF972)
- pfam09727
Location:74 → 255
- CortBP2; Cortactin-binding protein-2
- cl23720
Location:425 → 529
- RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)
RNA
-
NR_110608.3 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) lacks multiple exons and contains an alternate 3' terminal exon, compared to variant 1. This variant is represented as non-coding because it lacks the entire coding region found in variant 1.
- Source sequence(s)
-
AL445465, BC110829, DB126435
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000006.12 Reference GRCh38.p14 Primary Assembly
- Range
-
75291859..75493800 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_005248715.6 → XP_005248772.1 filamin-A-interacting protein 1 isoform X2
- UniProtKB/TrEMBL
-
A8K2G7
- Conserved Domains (4) summary
-
- PRK03918
Location:205 → 738
- PRK03918; chromosome segregation protein; Provisional
- pfam06156
Location:386 → 458
- DUF972; Protein of unknown function (DUF972)
- pfam09727
Location:74 → 255
- CortBP2; Cortactin-binding protein-2
- cl23720
Location:425 → 529
- RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)
-
XM_005248713.5 → XP_005248770.1 filamin-A-interacting protein 1 isoform X1
See identical proteins and their annotated locations for XP_005248770.1
- UniProtKB/Swiss-Prot
- B2RMU6, Q5VUL6, Q7Z7B0, Q86TC3, Q8N8B9, Q96SK6, Q9NVI8, Q9ULE5
- UniProtKB/TrEMBL
-
A8K2G7
- Conserved Domains (4) summary
-
- PRK03918
Location:205 → 738
- PRK03918; chromosome segregation protein; Provisional
- pfam06156
Location:386 → 458
- DUF972; Protein of unknown function (DUF972)
- pfam09727
Location:74 → 255
- CortBP2; Cortactin-binding protein-2
- cl23720
Location:425 → 529
- RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)
-
XM_047418648.1 → XP_047274604.1 filamin-A-interacting protein 1 isoform X4
- UniProtKB/TrEMBL
-
A0A075B6G6
-
XM_047418647.1 → XP_047274603.1 filamin-A-interacting protein 1 isoform X1
- UniProtKB/Swiss-Prot
- B2RMU6, Q5VUL6, Q7Z7B0, Q86TC3, Q8N8B9, Q96SK6, Q9NVI8, Q9ULE5
- UniProtKB/TrEMBL
-
A8K2G7
-
XM_011535756.3 → XP_011534058.1 filamin-A-interacting protein 1 isoform X3
- UniProtKB/TrEMBL
-
A0A075B6G6
- Related
-
ENST00000498523.1
- Conserved Domains (3) summary
-
- pfam05010
Location:102 → 328
- TACC; Transforming acidic coiled-coil-containing protein (TACC)
- pfam06156
Location:138 → 210
- DUF972; Protein of unknown function (DUF972)
- cl23720
Location:177 → 281
- RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060930.1 Alternate T2T-CHM13v2.0
- Range
-
76468681..76670584 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054355172.1 → XP_054211147.1 filamin-A-interacting protein 1 isoform X2
- UniProtKB/TrEMBL
-
A8K2G7
-
XM_054355171.1 → XP_054211146.1 filamin-A-interacting protein 1 isoform X1
- UniProtKB/Swiss-Prot
- B2RMU6, Q5VUL6, Q7Z7B0, Q86TC3, Q8N8B9, Q96SK6, Q9NVI8, Q9ULE5
- UniProtKB/TrEMBL
-
A8K2G7
-
XM_054355174.1 → XP_054211149.1 filamin-A-interacting protein 1 isoform X4
- UniProtKB/TrEMBL
-
A0A075B6G6
-
XM_054355170.1 → XP_054211145.1 filamin-A-interacting protein 1 isoform X1
- UniProtKB/Swiss-Prot
- B2RMU6, Q5VUL6, Q7Z7B0, Q86TC3, Q8N8B9, Q96SK6, Q9NVI8, Q9ULE5
- UniProtKB/TrEMBL
-
A8K2G7
-
XM_054355173.1 → XP_054211148.1 filamin-A-interacting protein 1 isoform X3
- UniProtKB/TrEMBL
-
A0A075B6G6