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    eIF3f1 eukaryotic translation initiation factor 3 subunit f1 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 40587, updated on 9-Dec-2024

    Summary

    Official Symbol
    eIF3f1provided by FlyBase
    Official Full Name
    eukaryotic translation initiation factor 3 subunit f1provided by FlyBase
    Primary source
    FLYBASE:FBgn0037270
    Locus tag
    Dmel_CG9769
    See related
    AllianceGenome:FB:FBgn0037270
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG9769; Dmel\CG9769; eIF3-S5; eif3f; eIF3f; Q9VN50
    Summary
    Enables metal-dependent deubiquitinase activity. Involved in defense response to bacterium and positive regulation of signal transduction. Predicted to be part of eukaryotic translation initiation factor 3 complex, eIF3m. Is expressed in adult head and organism. Human ortholog(s) of this gene implicated in autosomal recessive intellectual developmental disorder 67. Orthologous to human EIF3F (eukaryotic translation initiation factor 3 subunit F). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See eIF3f1 in Genome Data Viewer
    Location:
    82D2-82D2; 3-47.1 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (4712882..4714182, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (538604..539904, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene smallish Neighboring gene long non-coding RNA:CR44157 Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR44923 Neighboring gene Neprilysin 2

    Genomic regions, transcripts, and products

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables metal-dependent deubiquitinase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables metal-dependent deubiquitinase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables metallopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
     
    contributes_to translation initiation factor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables translation initiation factor activity IEA
    Inferred from Electronic Annotation
    more info
     
    contributes_to translation initiation factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables translation initiation factor binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables translation initiation factor binding IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    part_of eukaryotic translation initiation factor 3 complex IEA
    Inferred from Electronic Annotation
    more info
     
    part_of eukaryotic translation initiation factor 3 complex ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    part_of eukaryotic translation initiation factor 3 complex, eIF3m IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    eukaryotic translation initiation factor 3 subunit f1
    Names
    CG9769-PA
    eIF3f1-PA
    NP_649489.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      4712882..4714182 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_141232.3NP_649489.1  eukaryotic translation initiation factor 3 subunit f1 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_649489.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9VN50
      Related
      FBpp0078532
      Conserved Domains (1) summary
      cd08064
      Location:8274
      MPN_eIF3f; Mpr1p, Pad1p N-terminal (MPN) domains without catalytic isopeptidase activity, found in eIF3f