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    CG18787 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 59163, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG18787provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0042125
    Locus tag
    Dmel_CG18787
    See related
    AllianceGenome:FB:FBgn0042125
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG18787
    Summary
    Predicted to enable metal ion binding activity. Is expressed in adult head; embryonic/larval midgut; and organism. Orthologous to human NUP42 (nucleoporin 42). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG18787 in Genome Data Viewer
    Location:
    33B5-33B5; 2-45 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (11997900..11999340, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (11997900..11999340, complement)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene transcriptional Adaptor 1-2 Neighboring gene uncharacterized protein Neighboring gene Quetzalcoatl Neighboring gene transcriptional Adaptor 1-1 Neighboring gene Nfs1 cysteine desulfurase Neighboring gene 3-hydroxyacyl-CoA dehydratase 1 Neighboring gene Rhodopsin 5

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Adaptive impact of the chimeric gene Quetzalcoatl in Drosophila melanogaster. Rogers RL, et al. Proc Natl Acad Sci U S A, 2010 Jun 15. PMID 20534482, Free PMC Article
    2. Whole transcriptome screening for novel genes involved in meiosis and fertility in Drosophila melanogaster. Sun S, et al. Sci Rep, 2024 Feb 13. PMID 38351116, Free PMC Article
    3. Identification of genes involved in the same pathways using a Hidden Markov Model-based approach. Senf A, et al. Bioinformatics, 2009 Nov 15. PMID 19720676
    4. [Identification of C(2)M interacting proteins by yeast two-hybrid screening]. Yue SS, et al. Yi Chuan, 2015 Nov. PMID 26582530
    5. Drosophila histone locus bodies form by hierarchical recruitment of components. White AE, et al. J Cell Biol, 2011 May 16. PMID 21576393, Free PMC Article

    See all (27) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG18787-PB
    NP_652664.2
    • point mutation

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      11997900..11999340 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_144407.3 → NP_652664.2  uncharacterized protein Dmel_CG18787 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_652664.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q95T05, Q9I7N2
      Conserved Domains (2) summary
      smart00356
      Location:1 → 22
      ZnF_C3H1; zinc finger
      pfam13634
      Location:145 → 204
      Nucleoporin_FG; Nucleoporin FG repeat region
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q7K308 Q7K308
    Q8IGN1 Q8IGN1
    Q9I7N2 Q9I7N2

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