U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    scw screw [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 46000, updated on 9-Dec-2024

    Summary

    Official Symbol
    scwprovided by FlyBase
    Official Full Name
    screwprovided by FlyBase
    Primary source
    FLYBASE:FBgn0005590
    Locus tag
    Dmel_CG31695
    See related
    AllianceGenome:FB:FBgn0005590
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:LD30945; CG31695; Dmel\CG31695; DmSCW; l(2)37Ff; l(2)IG76; mor2; Scw; SCW
    Summary
    Enables protein heterodimerization activity and receptor ligand activity. Involved in several processes, including BMP signaling pathway; amnioserosa formation; and digestive tract mesoderm development. Located in extracellular space. Is expressed in several structures, including anlage in statu nascendi; antennal anlage; central brain anlage; central brain anlage in statu nascendi; and dorsal ectoderm anlage. Human ortholog(s) of this gene implicated in prostate cancer. Orthologous to several human genes including BMP5 (bone morphogenetic protein 5); BMP7 (bone morphogenetic protein 7); and BMP8A (bone morphogenetic protein 8a). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See scw in Genome Data Viewer
    Location:
    38A1-38A1; 2-54 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (19699379..19700968, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (19699379..19700968, complement)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR44978 Neighboring gene Leukocyte-antigen-related-like Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR44979 Neighboring gene uncharacterized protein Neighboring gene Nuclear factor Y-box B

    Genomic regions, transcripts, and products

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables cytokine activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables growth factor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein heterodimerization activity IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables receptor ligand activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in extracellular space IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in extracellular space ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 

    General protein information

    Preferred Names
    screw
    Names
    CG31695-PA
    CG31695-PB
    morphological defects 2
    scw-PA
    scw-PB

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      19699379..19700968 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001299159.1NP_001286088.1  screw, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001286088.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P54631, Q8INV8
      UniProtKB/TrEMBL
      X2JB15
      Conserved Domains (2) summary
      smart00204
      Location:300400
      TGFB; Transforming growth factor-beta (TGF-beta) family
      pfam00688
      Location:39254
      TGFb_propeptide; TGF-beta propeptide
    2. NM_080124.5NP_524863.3  screw, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_524863.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P54631, Q8INV8
      UniProtKB/TrEMBL
      X2JB15
      Related
      FBpp0080802
      Conserved Domains (2) summary
      smart00204
      Location:300400
      TGFB; Transforming growth factor-beta (TGF-beta) family
      pfam00688
      Location:39254
      TGFb_propeptide; TGF-beta propeptide