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    CG17141 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 42697, updated on 27-Dec-2024

    Summary

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    Official Symbol
    CG17141provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0039020
    Locus tag
    Dmel_CG17141
    See related
    AllianceGenome:FB:FBgn0039020
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG17141
    Summary
    Predicted to enable GTPase activity. Predicted to be involved in mitochondrial translation and regulation of mitochondrial translation. Predicted to be located in mitochondrial matrix. Predicted to be active in mitochondrion. Orthologous to human MTG1 (mitochondrial ribosome associated GTPase 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG17141 in Genome Data Viewer
    Location:
    94C4-94C4; 3-76 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (22746446..22747599, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (18572168..18573321, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Dicer-1 Neighboring gene uncharacterized protein Neighboring gene vreteno Neighboring gene uncharacterized protein Neighboring gene Heterochromatin Protein 1c Neighboring gene Ubiquitin-specific protease 12/46 Neighboring gene rumi Neighboring gene uncharacterized protein Neighboring gene Neprilysin-like 13

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Rumi is a CAP10 domain glycosyltransferase that modifies Notch and is required for Notch signaling. Acar M, et al. Cell, 2008 Jan 25. PMID 18243100, Free PMC Article
    2. Identification of genetic modifiers of CagA-induced epithelial disruption in Drosophila. Reid DW, et al. Front Cell Infect Microbiol, 2012. PMID 22919616, Free PMC Article
    3. The impact of genome variation and diet on the metabolic phenotype and microbiome composition of Drosophila melanogaster. Jehrke L, et al. Sci Rep, 2018 Apr 18. PMID 29670218, Free PMC Article
    4. mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster. Lepennetier G, et al. G3 (Bethesda), 2016 Jun 1. PMID 27172210, Free PMC Article
    5. CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans. Wei P, et al. Genome Res, 2020 Jan. PMID 31722958, Free PMC Article

    See all (23) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables GTPase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables GTPase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    involved_in mitochondrial translation IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in regulation of mitochondrial translation ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrial matrix ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    is_active_in mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG17141-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      22746446..22747599 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_142837.4 → NP_651094.2  uncharacterized protein Dmel_CG17141 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_651094.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q4V5C0, Q9VCU5
      Conserved Domains (2) summary
      cd01856
      Location:22 → 206
      YlqF; Circularly permuted YlqF GTPase
      TIGR03596
      Location:20 → 317
      GTPase_YlqF; ribosome biogenesis GTP-binding protein YlqF
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VCU5.2 Q9VCU5

    Gene LinkOut

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