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    Rv2819c CRISPR type III-associated RAMP protein Csm5 [ Mycobacterium tuberculosis H37Rv ]

    Gene ID: 888514, updated on 6-Oct-2023

    Summary

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    Gene symbol
    Rv2819c
    Gene description
    CRISPR type III-associated RAMP protein Csm5
    Locus tag
    Rv2819c
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mycobacterium tuberculosis H37Rv (strain: H37Rv, type-material: type strain of Mycobacterium tuberculosis)
    Lineage
    Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex
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    Genomic context

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    Sequence:
    NC_000962.3 (3126240..3127367, complement)

    NC_000962.3Genomic Context describing neighboring genes Neighboring gene CRISPR-associated endonuclease Cas1 Neighboring gene CRISPR-associated protein Csm6 Neighboring gene CRISPR type III-associated RAMP protein Csm4 Neighboring gene CRISPR type III-associated RAMP protein Csm3 Neighboring gene CRISPR type III-associated protein Csm2 Neighboring gene CRISPR-associated protein Cas10/Csm1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000962.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TubercuList--10 years after. Lew JM, et al. Tuberculosis (Edinb), 2011 Jan. PMID 20980199
    2. Re-annotation of the genome sequence of Mycobacterium tuberculosis H37Rv. Camus JC, et al. Microbiology (Reading), 2002 Oct. PMID 12368430
    3. Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence. Cole ST, et al. Nature, 1998 Jun 11. PMID 9634230

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    CRISPR type III-associated RAMP protein Csm5
    NP_217335.1
    • This region is a possible MT-complex-specific genomic island (See Becq et al., 2007 PMID:17545187).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000962.3 Reference assembly

      Range
      3126240..3127367 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_217335.1 CRISPR type III-associated RAMP protein Csm5 [Mycobacterium tuberculosis H37Rv]

      See identical proteins and their annotated locations for NP_217335.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      R4M946
      Conserved Domains (1) summary
      COG1332
      Location:8 → 373
      Csm5; CRISPR/Cas system CSM-associated protein Csm5, group 7 of RAMP superfamily [Defense mechanisms]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P9WJF5.1

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