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    Tb Tubby [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 43212, updated on 9-Dec-2024

    Summary

    Official Symbol
    Tbprovided by FlyBase
    Official Full Name
    Tubbyprovided by FlyBase
    Primary source
    FLYBASE:FBgn0243586
    Locus tag
    Dmel_CG5480
    See related
    AllianceGenome:FB:FBgn0243586
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG5480; Dmel\CG5480; Tu; TwdlA; Twdlalpha
    Summary
    Predicted to be a structural constituent of chitin-based larval cuticle. Predicted to be involved in body morphogenesis and chitin-based cuticle development. Predicted to be located in extracellular matrix. Predicted to be active in chitin-based extracellular matrix. Is expressed in dorsal head epidermis; embryonic dorsal epidermis; embryonic ventral epidermis; lateral head epidermis; and ventral head epidermis. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    Location:
    97C3-97C3; 3-91 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (26656440..26657531)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (22482162..22483253)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR46233 Neighboring gene TweedleD Neighboring gene beaten path VII Neighboring gene TweedleQ Neighboring gene amontillado

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables structural constituent of chitin-based cuticle ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables structural constituent of chitin-based larval cuticle IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in body morphogenesis ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in chitin-based cuticle development IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in chitin-based cuticle development ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    is_active_in chitin-based extracellular matrix IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in extracellular matrix ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    tubby
    Names
    CG5480-PA
    Tb-PA
    TweedleA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      26656440..26657531
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_143237.4NP_651494.1  tubby [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_651494.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VBD0
      Related
      FBpp0084408
      Conserved Domains (1) summary
      smart00690
      Location:86187
      DM5; Domain of unknown function, currently peculiar to Drosophila