U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    sosie sosie [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 42961, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    sosieprovided by FlyBase
    Official Full Name
    sosieprovided by FlyBase
    Primary source
    FLYBASE:FBgn0039232
    Locus tag
    Dmel_CG13636
    See related
    AllianceGenome:FB:FBgn0039232
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:RE05274; BcDNA:RE20019; CG13636; Dmel\CG13636; sie; Sosie
    Summary
    Involved in follicle cell of egg chamber migration; germarium-derived egg chamber formation; and sensory perception of sound. Located in apical plasma membrane and female germline ring canal. Is expressed in Johnston organ neurons; embryonic head sensory system; female germline cell; follicle cell; and sensory nervous system primordium. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See sosie in Genome Data Viewer
    Location:
    96A24-96A25; 3-85 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (24833952..24840488)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (20659674..20666210)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene RabX4 Neighboring gene Katazuke Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR45216 Neighboring gene uncharacterized protein Neighboring gene Epidermal stripes and patches

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Drosophila sosie functions with β(H)-Spectrin and actin organizers in cell migration, epithelial morphogenesis and cortical stability. Urwyler O, et al. Biol Open, 2012 Oct 15. PMID 23213377, Free PMC Article
    2. A Syndromic Neurodevelopmental Disorder Caused by Mutations in SMARCD1, a Core SWI/SNF Subunit Needed for Context-Dependent Neuronal Gene Regulation in Flies. Nixon KCJ, et al. Am J Hum Genet, 2019 Apr 4. PMID 30879640, Free PMC Article
    3. Nicastrin controls aspects of photoreceptor neuron specification and differentiation in the Drosophila eye. Zhang T, et al. Dev Dyn, 2005 Nov. PMID 16145661
    4. How do Wolbachia modify the Drosophila ovary? New evidences support the "titration-restitution" model for the mechanisms of Wolbachia-induced CI. He Z, et al. BMC Genomics, 2019 Jul 24. PMID 31340757, Free PMC Article
    5. Ectopic expression of S28A-mutated Histone H3 modulates longevity, stress resistance and cardiac function in Drosophila. Joos JP, et al. Sci Rep, 2018 Feb 13. PMID 29440697, Free PMC Article

    See all (30) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in follicle cell of egg chamber migration IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in germarium-derived egg chamber formation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in sensory perception of sound IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in apical plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in female germline ring canal IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    sosie
    Names
    CG13636-PA
    CG13636-PB
    CG13636-PC
    sosie-PA
    sosie-PB
    sosie-PC

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      24833952..24840488
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_170172.2 → NP_733046.2  sosie, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_733046.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8IMV5, Q8SXV1
      Related
      FBpp0084079

    2. NM_001260366.2 → NP_001247295.1  sosie, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001247295.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8IMV5, Q8SXV1

    3. NM_143038.2 → NP_651295.1  sosie, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_651295.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VC30
      Related
      FBpp0084080
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8SXV1 Q8SXV1
    Q9VC30 Q9VC30

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Molecular Biology Databases
    Research Materials
    Tools