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    Or88a Odorant receptor 88a [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 41715, updated on 9-Dec-2024

    Summary

    Official Symbol
    Or88aprovided by FlyBase
    Official Full Name
    Odorant receptor 88aprovided by FlyBase
    Primary source
    FLYBASE:FBgn0038203
    Locus tag
    Dmel_CG14360
    See related
    AllianceGenome:FB:FBgn0038203
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    88a; 88A.1; CG14360; Dmel\CG14360; DmOr88a; DOR99; or88a; OR88a
    Summary
    Enables ionotropic olfactory receptor activity. Involved in detection of chemical stimulus involved in sensory perception of smell. Predicted to be located in dendrite membrane. Predicted to be active in plasma membrane. Is expressed in several structures, including adult antennal lobe; adult olfactory receptor neuron Or88a; antennal lobe glomerulus VA1d; antennal segment 3 sense organ; and third segment of antenna. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See Or88a in Genome Data Viewer
    Location:
    88A8-88A8; 3-54 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (14109445..14110823)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (9935167..9936545)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Pyrokinin 1 receptor Neighboring gene uncharacterized protein Neighboring gene antisense RNA:CR44237 Neighboring gene uncharacterized protein Neighboring gene Kinesin family member 19A

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables ionotropic olfactory receptor activity HDA PubMed 
    enables odorant binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables odorant binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables olfactory receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables olfactory receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in dendrite membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    odorant receptor 88a
    Names
    CG14360-PA
    Or88a-PA

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      14109445..14110823
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_079624.3NP_524348.2  odorant receptor 88a [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_524348.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9VFN2
      UniProtKB/TrEMBL
      D7F9E0
      Related
      FBpp0082351, FBtr0082890
      Conserved Domains (1) summary
      pfam02949
      Location:75392
      7tm_6; 7tm Odorant receptor