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    CG6700 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 34496, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG6700provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0032305
    Locus tag
    Dmel_CG6700
    See related
    AllianceGenome:FB:FBgn0032305
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG6700
    Summary
    Predicted to be active in nucleus. Orthologous to human LENG8 (leukocyte receptor cluster member 8). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG6700 in Genome Data Viewer
    Location:
    32B1-32B1; 2-43 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (10837732..10842597, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (10837732..10842597, complement)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene Nitric oxide synthase Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene mir-4987 stem loop Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Porin2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Xmas-2 Homologues, the Main Component of the TREX-2 mRNA Export Complex. Nabirochkina EN, et al. Dokl Biochem Biophys, 2020 Nov. PMID 33368044
    2. Essential function of nitric oxide synthase in Drosophila. Regulski M, et al. Curr Biol, 2004 Oct 26. PMID 15498477
    3. A functional genomic screen combined with time-lapse microscopy uncovers a novel set of genes involved in dorsal closure of Drosophila embryos. Jankovics F, et al. PLoS One, 2011. PMID 21799798, Free PMC Article
    4. SR proteins control a complex network of RNA-processing events. Bradley T, et al. RNA, 2015 Jan. PMID 25414008, Free PMC Article
    5. DDX17 is involved in DNA damage repair and modifies FUS toxicity in an RGG-domain dependent manner. Fortuna TR, et al. Acta Neuropathol, 2021 Sep. PMID 34061233, Free PMC Article

    See all (33) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Component Evidence Code Pubs
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG6700-PA
    CG6700-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      10837732..10842597 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_135615.4 → NP_609459.1  uncharacterized protein Dmel_CG6700, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_609459.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B3DNL8, Q9VKP5
      Related
      FBpp0079776
      Conserved Domains (1) summary
      pfam03399
      Location:643 → 840
      SAC3_GANP; SAC3/GANP/Nin1/mts3/eIF-3 p25 family

    2. NM_001169473.2 → NP_001162944.1  uncharacterized protein Dmel_CG6700, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001162944.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B3DNL8, Q9VKP5
      Conserved Domains (1) summary
      pfam03399
      Location:643 → 840
      SAC3_GANP; SAC3/GANP/Nin1/mts3/eIF-3 p25 family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q95SZ5 Q95SZ5
    Q9VKP5 Q9VKP5

    Gene LinkOut

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