U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    na narrow abdomen [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 45338, updated on 9-Dec-2024

    Summary

    Official Symbol
    naprovided by FlyBase
    Official Full Name
    narrow abdomenprovided by FlyBase
    Primary source
    FLYBASE:FBgn0002917
    Locus tag
    Dmel_CG1517
    See related
    AllianceGenome:FB:FBgn0002917
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    alpha1U; CG1517; Dma1U; Dmalpha1U; Dmel\CG1517; har; har 38; har 85; har38; har85; harA; Na; NA; NALCN
    Summary
    Enables monoatomic ion channel activity. Involved in several processes, including locomotor rhythm; response to anesthetic; and sensory perception of touch. Located in axon terminus and neuronal cell body. Part of cation channel complex. Is expressed in adult head; adult optic lobe; ellipsoid body; spermatozoon; and supraesophageal ganglion. Human ortholog(s) of this gene implicated in congenital limbs-face contractures-hypotonia-developmental delay syndrome. Orthologous to human NALCN (sodium leak channel, non-selective). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Location:
    12E6-12E7; 1-48 cM
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (14266367..14277416)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (14160400..14171449)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene antisense RNA:CR46473 Neighboring gene mushroom body defect Neighboring gene uncharacterized protein Neighboring gene Tyrosine aminotransferase Neighboring gene uncharacterized protein Neighboring gene Mucin 12Ea Neighboring gene long non-coding RNA:CR44963 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Bibliography

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables monoatomic cation channel activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables monoatomic cation channel activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables monoatomic ion channel activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in adult locomotory behavior IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in circadian behavior IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in locomotor rhythm IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in monoatomic ion transport IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in positive regulation of synaptic transmission, GABAergic IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in positive regulation of synaptic transmission, cholinergic IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in regulation of circadian rhythm IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in response to anesthetic IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in rhythmic behavior IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in sensory perception of touch IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in social behavior IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in axon terminus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of cation channel complex IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in neuronal cell body IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    narrow abdomen
    Names
    CG1517-PF
    CG1517-PG
    NARROW ABDOMEN
    halothane-resistant
    na-PF
    na-PG

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      14266367..14277416
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001103511.3NP_001096981.2  narrow abdomen, isoform F [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001096981.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A8JUW5, Q8I877
      Conserved Domains (1) summary
      pfam00520
      Location:15711793
      Ion_trans; Ion transport protein
    2. NM_167401.3NP_727772.3  narrow abdomen, isoform G [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_727772.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8I877, R9PY25
      Conserved Domains (1) summary
      pfam00520
      Location:15621784
      Ion_trans; Ion transport protein