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    R3hcc1 R3H domain and coiled-coil containing 1 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 361064, updated on 27-Nov-2024

    Summary

    Official Symbol
    R3hcc1provided by RGD
    Official Full Name
    R3H domain and coiled-coil containing 1provided by RGD
    Primary source
    RGD:1311790
    See related
    EnsemblRapid:ENSRNOG00000016777 AllianceGenome:RGD:1311790
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1311790
    Summary
    Predicted to enable nucleic acid binding activity. Orthologous to human R3HCC1 (R3H domain and coiled-coil containing 1). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in Kidney (RPKM 94.8), Testes (RPKM 92.0) and 9 other tissues See more
    Orthologs
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    Genomic context

    See R3hcc1 in Genome Data Viewer
    Location:
    15p11
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 15 NC_086033.1 (51184328..51191640, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 15 NC_051350.1 (44774552..44781864, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 15 NC_005114.4 (51368940..51384831, complement)

    Chromosome 15 - NC_086033.1Genomic Context describing neighboring genes Neighboring gene ectonucleoside triphosphate diphosphohydrolase 4 Neighboring gene lysyl oxidase-like 2 Neighboring gene charged multivesicular body protein 7 Neighboring gene TNF receptor superfamily member 10b Neighboring gene Rho-related BTB domain containing 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General protein information

    Preferred Names
    R3H and coiled-coil domain-containing protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001399508.1NP_001386437.1  R3H and coiled-coil domain-containing protein 1

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000015
      Related
      ENSRNOP00000088836.1, ENSRNOT00000101142.2

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086033.1 Reference GRCr8

      Range
      51184328..51191640 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)