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    Nmbr neuromedin B receptor [ Mus musculus (house mouse) ]

    Gene ID: 18101, updated on 27-Nov-2024

    Summary

    Official Symbol
    Nmbrprovided by MGI
    Official Full Name
    neuromedin B receptorprovided by MGI
    Primary source
    MGI:MGI:1100525
    See related
    Ensembl:ENSMUSG00000019865 AllianceGenome:MGI:1100525
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Summary
    Predicted to enable neuropeptide receptor activity. Involved in several processes, including antiviral innate immune response; negative regulation of interleukin-6 production; and positive regulation of osteoclast proliferation. Predicted to be located in cytosol. Predicted to be active in plasma membrane. Is expressed in brain; dentate gyrus subgranular zone; lung; lung epithelium; and lung mesenchyme. Orthologous to human NMBR (neuromedin B receptor). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in testis adult (RPKM 4.4), frontal lobe adult (RPKM 2.7) and 5 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Nmbr in Genome Data Viewer
    Location:
    10 A2; 10 5.5 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (14634894..14647202)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (14759356..14771458)

    Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 57851 Neighboring gene RIKEN cDNA 1700016L04 gene Neighboring gene gap junction protein, epsilon 1 Neighboring gene heat shock protein 8 pseudogene Neighboring gene STARR-seq mESC enhancer starr_25840 Neighboring gene STARR-seq mESC enhancer starr_25841 Neighboring gene STARR-seq mESC enhancer starr_25843 Neighboring gene predicted gene, 23892 Neighboring gene centrosomal protein 55 pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 
    • Targeted (1)  1 citation

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables bombesin receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables neuropeptide receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables neuropeptide receptor activity ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    neuromedin-B receptor
    Names
    NMB-R
    neuromedin-B-preferring bombesin receptor

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_008703.3NP_032729.1  neuromedin-B receptor

      See identical proteins and their annotated locations for NP_032729.1

      Status: VALIDATED

      Source sequence(s)
      AC111044
      Consensus CDS
      CCDS23707.1
      UniProtKB/Swiss-Prot
      O54799
      UniProtKB/TrEMBL
      Q0VEH1
      Related
      ENSMUSP00000020015.4, ENSMUST00000020015.10
      Conserved Domains (1) summary
      pfam00001
      Location:60322
      7tm_1; 7 transmembrane receptor (rhodopsin family)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000076.7 Reference GRCm39 C57BL/6J

      Range
      14634894..14647202
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030244941.2XP_030100801.1  neuromedin-B receptor isoform X1

      Conserved Domains (2) summary
      cd14964
      Location:1642
      7tm_GPCRs; TM helix 2 [structural motif]
      cl28897
      Location:1273
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily