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    CG10803 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 31320, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG10803provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0029666
    Locus tag
    Dmel_CG10803
    See related
    AllianceGenome:FB:FBgn0029666
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG10803; rop-1
    Summary
    Predicted to enable RNA binding activity. Predicted to be involved in regulation of gene expression. Predicted to be part of ribonucleoprotein complex. Is expressed in organism. Orthologous to human RO60 (Ro60, Y RNA binding protein). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG10803 in Genome Data Viewer
    Location:
    3D4-3D4; 1-3 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (3485650..3490915)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (3379683..3384948)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR44999 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Growth arrest specific protein 8 Neighboring gene Dpr-interacting protein alpha Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collaborative Control of Cell Cycle Progression by the RNA Exonuclease Dis3 and Ras Is Conserved Across Species. Snee MJ, et al. Genetics, 2016 Jun. PMID 27029730, Free PMC Article
    2. Analysis of the eye developmental pathway in Drosophila using DNA microarrays. Michaut L, et al. Proc Natl Acad Sci U S A, 2003 Apr 1. PMID 12655063, Free PMC Article
    3. A protein complex network of Drosophila melanogaster. Guruharsha KG, et al. Cell, 2011 Oct 28. PMID 22036573, Free PMC Article
    4. Proteome-wide dataset supporting the study of ancient metazoan macromolecular complexes. Phanse S, et al. Data Brief, 2016 Mar. PMID 26870755, Free PMC Article
    5. Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes. López-Varea A, et al. G3 (Bethesda), 2021 Dec 8. PMID 34599810, Free PMC Article

    See all (24) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables RNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables RNA binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    involved_in regulation of gene expression ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    part_of ribonucleoprotein complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of ribonucleoprotein complex ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG10803-PA
    CG10803-PB
    CG10803-PC
    CG10803-PD
    CG10803-PE

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      3485650..3490915
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001272287.1 → NP_001259216.1  uncharacterized protein Dmel_CG10803, isoform E [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001259216.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9PDP5
      Conserved Domains (1) summary
      pfam05731
      Location:197 → 394
      TROVE; TROVE domain

    2. NM_001272286.1 → NP_001259215.1  uncharacterized protein Dmel_CG10803, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001259215.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9PGK9
      Conserved Domains (1) summary
      pfam05731
      Location:134 → 331
      TROVE; TROVE domain

    3. NM_001272284.2 → NP_001259213.1  uncharacterized protein Dmel_CG10803, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001259213.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9PGK9
      Conserved Domains (1) summary
      pfam05731
      Location:134 → 331
      TROVE; TROVE domain

    4. NM_001272285.2 → NP_001259214.1  uncharacterized protein Dmel_CG10803, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001259214.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9PGK9
      Conserved Domains (1) summary
      pfam05731
      Location:134 → 331
      TROVE; TROVE domain

    5. NM_130708.4 → NP_570064.1  uncharacterized protein Dmel_CG10803, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_570064.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q95TX6, Q9W4R7
      Related
      FBpp0070544
      Conserved Domains (1) summary
      pfam05731
      Location:197 → 394
      TROVE; TROVE domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    M9PDP5 M9PDP5
    M9PGK9 M9PGK9
    Q9W4R7 Q9W4R7

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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