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    Cbp53E Calbindin 53E [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 36905, updated on 9-Dec-2024

    Summary

    Official Symbol
    Cbp53Eprovided by FlyBase
    Official Full Name
    Calbindin 53Eprovided by FlyBase
    Primary source
    FLYBASE:FBgn0004580
    Locus tag
    Dmel_CG6702
    See related
    AllianceGenome:FB:FBgn0004580
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Calb; CALB2; CALB2/calretinin; cbn; Cbp33; cbp53E; CG6702; Dcbp; DCBP; Dcp; Dmel\CG6702
    Summary
    Predicted to enable calcium ion binding activity. Predicted to be involved in regulation of long-term synaptic potentiation and regulation of presynaptic cytosolic calcium ion concentration. Located in type II terminal bouton and type III terminal bouton. Is expressed in several structures, including NMJ bouton; central nervous system; ganglia; organism subdivision; and presumptive embryonic/larval system. Orthologous to several human genes including CALB2 (calbindin 2). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See Cbp53E in Genome Data Viewer
    Location:
    53E4-53E4; 2-81 cM
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (16973927..16996057)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (12861432..12883562)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene transfer RNA:Glycine-GCC 1-8 Neighboring gene long non-coding RNA:CR44377 Neighboring gene uncharacterized protein Neighboring gene ste24c prenyl protease type I Neighboring gene ste24b prenyl protease type I Neighboring gene prenyl protease type I

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables calcium ion binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables calcium ion binding TAS
    Traceable Author Statement
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in regulation of long-term synaptic potentiation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in regulation of presynaptic cytosolic calcium ion concentration IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in dendrite IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in synapse IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in terminal bouton IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in type II terminal bouton IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in type III terminal bouton IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    calbindin 53E
    Names
    CG6702-PA
    CG6702-PB
    Cbp53E-PA
    Cbp53E-PB
    calbindin
    calbindin 32
    calbindin-32
    calretinin

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      16973927..16996057
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_057490.4NP_476838.1  calbindin 53E, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_476838.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P41044, Q9V7W4
      UniProtKB/TrEMBL
      A0A0B4LFM0
      Related
      FBpp0086204
      Conserved Domains (1) summary
      cd16179
      Location:40301
      EFh_HEF_CBN; EF-hand, calcium binding motif, found in Drosophila melanogaster calbindin-32 (CBN) and similar proteins
    2. NM_001299582.1NP_001286511.1  calbindin 53E, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001286511.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P41044, Q9V7W4
      UniProtKB/TrEMBL
      A0A0B4LFM0
      Conserved Domains (1) summary
      cd16179
      Location:40301
      EFh_HEF_CBN; EF-hand, calcium binding motif, found in Drosophila melanogaster calbindin-32 (CBN) and similar proteins