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    CG6000 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 42851, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG6000provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0039145
    Locus tag
    Dmel_CG6000
    See related
    AllianceGenome:FB:FBgn0039145
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:RE30346; Dmel\CG6000
    Summary
    Is expressed in adult heart and organism. Orthologous to human TSTD1 (thiosulfate sulfurtransferase like domain containing 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG6000 in Genome Data Viewer
    Location:
    95D11-95D11; 3-82 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (24054391..24055092)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (19880113..19880814)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR44097 Neighboring gene Autophagy-related 6 Neighboring gene Phosphatidylserine decarboxylase Neighboring gene Heat shock protein 68 Neighboring gene Structural maintenance of chromosomes 1 Neighboring gene eukaryotic translation initiation factor 4E homologous protein Neighboring gene Syntaxin 1A

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. New levels of transcriptome complexity at upper thermal limits in wild Drosophila revealed by exon expression analysis. Telonis-Scott M, et al. Genetics, 2013 Nov. PMID 24002645, Free PMC Article
    2. Selection for cold resistance alters gene transcript levels in Drosophila melanogaster. Telonis-Scott M, et al. J Insect Physiol, 2009 Jun. PMID 19232407
    3. A genetic screen for suppressors of Drosophila NSF2 neuromuscular junction overgrowth. Laviolette MJ, et al. Genetics, 2005 Jun. PMID 15834148, Free PMC Article
    4. Accentuate the negative: proteome comparisons using the negative proteome database. Reiter LT, et al. Fly (Austin), 2007 May-Jun. PMID 18820470
    5. Development of a Clickable Probe for Profiling of Protein Glutathionylation in the Central Cellular Metabolism of E. coli and Drosophila. Feng S, et al. Chem Biol, 2015 Nov 19. PMID 26526100

    See all (24) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Component Evidence Code Pubs
    is_active_in mitochondrion ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG6000-PC
    CG6000-PD

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      24054391..24055092
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001300566.1 → NP_001287495.1  uncharacterized protein Dmel_CG6000, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001287495.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VCD9
      Conserved Domains (1) summary
      cd01519
      Location:43 → 148
      RHOD_HSP67B2; Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.

    2. NM_142953.2 → NP_651210.3  uncharacterized protein Dmel_CG6000, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_651210.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VCD9
      Conserved Domains (1) summary
      cd01519
      Location:43 → 148
      RHOD_HSP67B2; Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8SYW6 Q8SYW6
    Q9VCD9 Q9VCD9

    Gene LinkOut

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