U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    CG42284 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 37621, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    CG42284provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0259179
    Locus tag
    Dmel_CG42284
    See related
    AllianceGenome:FB:FBgn0259179
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG13528; CG13529; CG30264; CG30266; Dmel\CG42284
    Old locus tag
    Dmel_CG30264; Dmel_CG30266
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CG42284 in Genome Data Viewer
    Location:
    59B2-59B2; 2-101 cM
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (22821430..22828903)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (18708935..18716426)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene Cyclin B Neighboring gene stall Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Major Facilitator Superfamily Transporter 1 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Stall encodes an ADAMTS metalloprotease and interacts genetically with Delta in Drosophila ovarian follicle formation. Ozdowski EF, et al. Genetics, 2009 Nov. PMID 19752215, Free PMC Article
    2. Molecular Profiling of the Drosophila Antenna Reveals Conserved Genes Underlying Olfaction in Insects. Mohapatra P, et al. G3 (Bethesda), 2019 Nov 5. PMID 31527046, Free PMC Article
    3. Genome-wide analysis in Drosophila reveals age-specific effects of SNPs on fitness traits. Durham MF, et al. Nat Commun, 2014 Jul 8. PMID 25000897
    4. The impact of genome variation and diet on the metabolic phenotype and microbiome composition of Drosophila melanogaster. Jehrke L, et al. Sci Rep, 2018 Apr 18. PMID 29670218, Free PMC Article
    5. circRNA biogenesis competes with pre-mRNA splicing. Ashwal-Fluss R, et al. Mol Cell, 2014 Oct 2. PMID 25242144

    See all (23) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    uncharacterized protein
    Names
    CG42284-PD
    CG42284-PE

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      22821430..22828903
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_137876.4 → NP_611720.3  uncharacterized protein Dmel_CG42284, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_611720.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q4V4D9, Q9W1Z4
      Conserved Domains (3) summary
      sd00045
      Location:165 → 197
      ANK; ANK repeat [structural motif]
      pfam05186
      Location:289 → 330
      Dpy-30; Dpy-30 motif
      pfam12796
      Location:135 → 231
      Ank_2; Ankyrin repeats (3 copies)

    2. NM_001299817.2 → NP_001286746.1  uncharacterized protein Dmel_CG42284, isoform E [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001286746.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4LG67
      Conserved Domains (4) summary
      cd00204
      Location:281 → 397
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam05186
      Location:37 → 78
      Dpy-30; Dpy-30 motif
      pfam12796
      Location:281 → 378
      Ank_2; Ankyrin repeats (3 copies)
      sd00045
      Location:312 → 344
      ANK; ANK repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A0A0B4LG67 A0A0B4LG67
    Q9W1Z4 Q9W1Z4

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Molecular Biology Databases
    Research Materials
    Tools