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    Or9a Odorant receptor 9a [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 31975, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Or9aprovided by FlyBase
    Official Full Name
    Odorant receptor 9aprovided by FlyBase
    Primary source
    FLYBASE:FBgn0030204
    Locus tag
    Dmel_CG15302
    See related
    AllianceGenome:FB:FBgn0030204
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    9a; 9E.1; CG15302; Dmel\CG15302; DmOr9a; DOR95; or9a; OR9a
    Summary
    Enables ionotropic olfactory receptor activity. Involved in detection of chemical stimulus involved in sensory perception of smell. Located in plasma membrane. Is expressed in adult olfactory receptor neuron Or9a; antennal lobe glomerulus VM3; wing hinge primordium; and wing pouch. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

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    See Or9a in Genome Data Viewer
    Location:
    9C4-9C4; 1-31 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (10458186..10459676, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (10352219..10353709, complement)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene RabX2 Neighboring gene uncharacterized protein Neighboring gene Neb-cGP Neighboring gene no circadian temperature entrainment Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. "Super e-noses": Multi-layer perceptron classification of volatile odorants from the firing rates of cross-species olfactory receptor arrays. Bachtiar LR, et al. Annu Int Conf IEEE Eng Med Biol Soc, 2014. PMID 25570118
    2. Comparative chemosensation from receptors to ecology. Bargmann CI. Nature, 2006 Nov 16. PMID 17108953
    3. Evolution of herbivory in Drosophilidae linked to loss of behaviors, antennal responses, odorant receptors, and ancestral diet. Goldman-Huertas B, et al. Proc Natl Acad Sci U S A, 2015 Mar 10. PMID 25624509, Free PMC Article
    4. Improving odorant chemical class prediction with multi-layer perceptrons using temporal odorant spike responses from drosophila melanogaster olfactory receptor neurons. Bachtiar LR, et al. Annu Int Conf IEEE Eng Med Biol Soc, 2016 Aug. PMID 28269711
    5. Atypical membrane topology and heteromeric function of Drosophila odorant receptors in vivo. Benton R, et al. PLoS Biol, 2006 Feb. PMID 16402857, Free PMC Article

    See all (69) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables ionotropic olfactory receptor activity HDA PubMed 
    enables odorant binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables odorant binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables olfactory receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables olfactory receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in detection of chemical stimulus involved in sensory perception of smell HDA PubMed 
    involved_in detection of chemical stimulus involved in sensory perception of smell IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in sensory perception of smell IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in dendrite membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane HDA PubMed 
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    odorant receptor 9a
    Names
    CG15302-PA
    Or9a-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      10458186..10459676 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_078552.3 → NP_511107.1  odorant receptor 9a [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_511107.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9W2U9
      Related
      FBpp0071396, FBtr0071462
      Conserved Domains (1) summary
      pfam02949
      Location:68 → 381
      7tm_6; 7tm Odorant receptor
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9W2U9.1 Q9W2U9

    Gene LinkOut

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