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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001042533.3 → NP_001035998.1 ribosomal oxygenase 2 isoform a
See identical proteins and their annotated locations for NP_001035998.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longer isoform (A). Variants 1 and 2 encode the same protein (isoform A).
- Source sequence(s)
-
AC110491, AL550737, AY302110, DA310030
- Consensus CDS
-
CCDS43114.1
- UniProtKB/Swiss-Prot
- D3DN35, Q6AHW4, Q6SKS0, Q8IU69, Q8IUF6, Q8IUF7, Q8IUF8, Q96C17, Q96KB0
- UniProtKB/TrEMBL
- A0A6M8YDW1, A0A6M8YDW2
- Related
- ENSP00000328251.6, ENST00000333396.11
- Conserved Domains (1) summary
-
- pfam08007
Location:52 → 364
- Cupin_4; Cupin superfamily protein
-
NM_001261829.2 → NP_001248758.1 ribosomal oxygenase 2 isoform b
See identical proteins and their annotated locations for NP_001248758.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) uses alternate splice sites in the 5' UTR and 3' coding region, compared to variant 1, and encodes a shorter protein (isoform B), compared to isoform A. Variants 3 and 4 encode the same protein (isoform B).
- Source sequence(s)
-
AC026100, AC110491, AK027299, DA310030
- Consensus CDS
-
CCDS2929.1
- UniProtKB/TrEMBL
-
A0A6M8YDW2
- Conserved Domains (1) summary
-
- pfam08007
Location:52 → 363
- Cupin_4; Cupin superfamily protein
-
NM_032778.6 → NP_116167.3 ribosomal oxygenase 2 isoform b
See identical proteins and their annotated locations for NP_116167.3
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) uses an alternate splice site in the 3' coding region, compared to variant 1, and encodes a shorter protein (isoform B), compared to isoform A. Variants 3 and 4 encode the same protein (isoform B).
- Source sequence(s)
-
AB083190, AC026100, AC110491, AL550737, DA310030
- Consensus CDS
-
CCDS2929.1
- UniProtKB/TrEMBL
-
A0A6M8YDW2
- Related
- ENSP00000353395.4, ENST00000360258.8
- Conserved Domains (1) summary
-
- pfam08007
Location:52 → 363
- Cupin_4; Cupin superfamily protein
-
NM_153182.4 → NP_694822.2 ribosomal oxygenase 2 isoform a
See identical proteins and their annotated locations for NP_694822.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) uses an alternate splice site in the 5' UTR, compared to variant 1, and encodes isoform A. Variants 1 and 2 encode the same protein (isoform A).
- Source sequence(s)
-
AC110491, DA310030, DQ453796
- Consensus CDS
-
CCDS43114.1
- UniProtKB/Swiss-Prot
- D3DN35, Q6AHW4, Q6SKS0, Q8IU69, Q8IUF6, Q8IUF7, Q8IUF8, Q96C17, Q96KB0
- UniProtKB/TrEMBL
- A0A6M8YDW1, A0A6M8YDW2
- Related
- ENSP00000377748.2, ENST00000394198.7
- Conserved Domains (1) summary
-
- pfam08007
Location:52 → 364
- Cupin_4; Cupin superfamily protein
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000003.12 Reference GRCh38.p14 Primary Assembly
- Range
-
97941818..97972431 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047449085.1 → XP_047305041.1 ribosomal oxygenase 2 isoform X2
- UniProtKB/TrEMBL
-
A0A6M8YDW2
-
XM_005247838.5 → XP_005247895.1 ribosomal oxygenase 2 isoform X1
See identical proteins and their annotated locations for XP_005247895.1
- UniProtKB/Swiss-Prot
- D3DN35, Q6AHW4, Q6SKS0, Q8IU69, Q8IUF6, Q8IUF7, Q8IUF8, Q96C17, Q96KB0
- UniProtKB/TrEMBL
- A0A6M8YDW1, A0A6M8YDW2
- Conserved Domains (1) summary
-
- pfam08007
Location:52 → 364
- Cupin_4; Cupin superfamily protein
-
XM_011513244.4 → XP_011511546.1 ribosomal oxygenase 2 isoform X5
- Conserved Domains (1) summary
-
- cl21464
Location:7 → 133
- cupin_like; Conserved domain found in cupin and related proteins
-
XM_047449086.1 → XP_047305042.1 ribosomal oxygenase 2 isoform X3
-
XM_047449087.1 → XP_047305043.1 ribosomal oxygenase 2 isoform X4
- Related
- ENSP00000424955.1, ENST00000514314.5
Alternate T2T-CHM13v2.0
Genomic
-
NC_060927.1 Alternate T2T-CHM13v2.0
- Range
-
100645556..100676171 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054348142.1 → XP_054204117.1 ribosomal oxygenase 2 isoform X1
- UniProtKB/TrEMBL
- A0A6M8YDW2, A0A6M8YHF9
-
XM_054348143.1 → XP_054204118.1 ribosomal oxygenase 2 isoform X2
- UniProtKB/TrEMBL
-
A0A6M8YDW2
-
XM_054348146.1 → XP_054204121.1 ribosomal oxygenase 2 isoform X5
-
XM_054348144.1 → XP_054204119.1 ribosomal oxygenase 2 isoform X3
-
XM_054348145.1 → XP_054204120.1 ribosomal oxygenase 2 isoform X4