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    LOC100911221 uncharacterized LOC100911221 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 100911221, updated on 17-Aug-2024

    Summary

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    Symbol
    LOC100911221provided by RGD
    Full Name
    uncharacterized LOC100911221provided by RGD
    Primary source
    RGD:6494360
    See related
    AllianceGenome:RGD:6494360
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Expression
    Biased expression in Adrenal (RPKM 59.5), Lung (RPKM 29.9) and 9 other tissues See more
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    Genomic context

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    See LOC100911221 in Genome Data Viewer
    Location:
    5q33
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 5 NC_086023.1 (115013255..115064929)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 5 NC_051340.1 (109897523..109949196)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 5 NC_005104.4 (114014532..114066203)

    Chromosome 5 - NC_086023.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120102921 Neighboring gene Jun proto-oncogene, AP-1 transcription factor subunit Neighboring gene uncharacterized LOC102550339 Neighboring gene uncharacterized LOC134486951 Neighboring gene uncharacterized LOC120102923

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086023.1 Reference GRCr8

      Range
      115013255..115064929
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_010051907.1 RNA Sequence

    2. XR_010051904.1 RNA Sequence

    3. XR_010051908.1 RNA Sequence

    4. XR_010051894.1 RNA Sequence

    5. XR_010051905.1 RNA Sequence

    6. XR_010051899.1 RNA Sequence

    7. XR_010051898.1 RNA Sequence

    8. XR_010051902.1 RNA Sequence

    9. XR_010051900.1 RNA Sequence

    10. XR_010051901.1 RNA Sequence

    11. XR_010051903.1 RNA Sequence

    12. XR_010051906.1 RNA Sequence

    13. XR_010051895.1 RNA Sequence

    14. XR_010051896.1 RNA Sequence

    15. XR_010051897.1 RNA Sequence

    16. XR_010051885.1 RNA Sequence

    17. XR_010051912.1 RNA Sequence

    18. XR_010051917.1 RNA Sequence

    19. XR_010051892.1 RNA Sequence

    20. XR_010051870.1 RNA Sequence

    21. XR_010051916.1 RNA Sequence

    22. XR_010051887.1 RNA Sequence

    23. XR_010051909.1 RNA Sequence

    24. XR_010051877.1 RNA Sequence

    25. XR_010051872.1 RNA Sequence

    26. XR_010051886.1 RNA Sequence

    27. XR_010051871.1 RNA Sequence

    28. XR_010051888.1 RNA Sequence

    29. XR_010051913.1 RNA Sequence

    30. XR_010051883.1 RNA Sequence

    31. XR_010051873.1 RNA Sequence

    32. XR_010051891.1 RNA Sequence

    33. XR_010051875.1 RNA Sequence

    34. XR_010051878.1 RNA Sequence

    35. XR_010051876.1 RNA Sequence

    36. XR_010051879.1 RNA Sequence

    37. XR_010051889.1 RNA Sequence

    38. XR_010051880.1 RNA Sequence

    39. XR_010051869.1 RNA Sequence

    40. XR_010051874.1 RNA Sequence

    41. XR_010051893.1 RNA Sequence

    42. XR_010051915.1 RNA Sequence

    43. XR_010051914.1 RNA Sequence

    44. XR_010051881.1 RNA Sequence

    45. XR_010051884.1 RNA Sequence

    46. XR_010051890.1 RNA Sequence

    47. XR_010051910.1 RNA Sequence

    48. XR_010051911.1 RNA Sequence

    49. XR_010051882.1 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

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