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    lncRNA:CR9284 long non-coding RNA:CR9284 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 12798136, updated on 11-Sep-2024

    Summary

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    Official Symbol
    lncRNA:CR9284provided by FlyBase
    Official Full Name
    long non-coding RNA:CR9284provided by FlyBase
    Primary source
    FLYBASE:FBgn0046297
    Locus tag
    Dmel_CR9284
    See related
    AllianceGenome:FB:FBgn0046297
    Gene type
    ncRNA
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    anon-WO0140519.157; BEST:GH11908; bs30g10.y1; CG9284; CR9284; Dmel\CR9284; Tes101
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    Genomic context

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    See lncRNA:CR9284 in Genome Data Viewer
    Location:
    58A2-58A2; 2-97 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (21803402..21804338)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (17690907..17691843)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene tracheal-prostasin Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genomic analysis of Drosophila chromosome underreplication reveals a link between replication control and transcriptional territories. Belyakin SN, et al. Proc Natl Acad Sci U S A, 2005 Jun 7. PMID 15928082, Free PMC Article
    2. Transcriptional activation in Drosophila spermatogenesis involves the mutually dependent function of aly and a novel meiotic arrest gene cookie monster. Jiang J, et al. Development, 2003 Feb. PMID 12490562
    3. Spatially revealed roles for lncRNAs in Drosophila spermatogenesis, Y chromosome function and evolution. Shao Z, et al. Nat Commun, 2024 May 7. PMID 38714658, Free PMC Article
    4. Rapidly evolving genes of Drosophila: differing levels of selective pressure in testis, ovary, and head tissues between sibling species. Jagadeeshan S, et al. Mol Biol Evol, 2005 Sep. PMID 15917496
    5. Conserved properties of Drosophila and human spermatozoal mRNA repertoires. Fischer BE, et al. Proc Biol Sci, 2012 Jul 7. PMID 22378807, Free PMC Article

    See all (13) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    • lncRNA:CR9284-RD; Dmel\lncRNA:CR9284-RD; CR9284-RD; Dmel\CR9284-RD
    • lncRNA:CR9284-RE; Dmel\lncRNA:CR9284-RE; CR9284-RE; Dmel\CR9284-RE

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      21803402..21804338
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. NR_124684.1 RNA Sequence

      Status: REVIEWED

    2. NR_124685.1 RNA Sequence

      Status: REVIEWED

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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