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    lncRNA:CR43911 long non-coding RNA:CR43911 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 14462858, updated on 11-Sep-2024

    Summary

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    Official Symbol
    lncRNA:CR43911provided by FlyBase
    Official Full Name
    long non-coding RNA:CR43911provided by FlyBase
    Primary source
    FLYBASE:FBgn0264512
    Locus tag
    Dmel_CR43911
    See related
    AllianceGenome:FB:FBgn0264512
    Gene type
    ncRNA
    RNA name
    lncRNA
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CR43911; Dmel\CR43911
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    Genomic context

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    See lncRNA:CR43911 in Genome Data Viewer
    Location:
    70A4-70A4; 3-40 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (13302409..13302810)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (13295509..13295910)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR44557 Neighboring gene long non-coding RNA:CR44555 Neighboring gene Sex Peptide Neighboring gene long non-coding RNA:CR44558

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Spatially revealed roles for lncRNAs in Drosophila spermatogenesis, Y chromosome function and evolution. Shao Z, et al. Nat Commun, 2024 May 7. PMID 38714658, Free PMC Article
    2. Cold acclimation wholly reorganizes the Drosophila melanogaster transcriptome and metabolome. MacMillan HA, et al. Sci Rep, 2016 Jun 30. PMID 27357258, Free PMC Article
    3. Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster. Liu X, et al. RNA, 2017 Dec. PMID 28851752, Free PMC Article
    4. The many landscapes of recombination in Drosophila melanogaster. Comeron JM, et al. PLoS Genet, 2012. PMID 23071443, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    • lncRNA:CR43911-RA; Dmel\lncRNA:CR43911-RA; CR43911-RA; Dmel\CR43911-RA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      13302409..13302810
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. NR_073932.2 RNA Sequence

      Status: REVIEWED

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.