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    Cul5 Cullin 5 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 43434, updated on 9-Dec-2024

    Summary

    Official Symbol
    Cul5provided by FlyBase
    Official Full Name
    Cullin 5provided by FlyBase
    Primary source
    FLYBASE:FBgn0288875
    Locus tag
    Dmel_CG1401
    See related
    AllianceGenome:FB:FBgn0288875
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG1401; cul-5; Cul-5; cul5; CUL5; Cullin5; Dmel\CG1401; shkl
    Summary
    Enables ubiquitin ligase complex scaffold activity. Involved in several processes, including negative regulation of receptor signaling pathway via JAK-STAT; oogenesis; and sensory organ precursor cell fate determination. Part of Cul5-RING ubiquitin ligase complex. Is expressed in several structures, including adult head; anterior-posterior compartment boundary of the antennal disc; epithelium; ganglia; and imaginal disc. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See Cul5 in Genome Data Viewer
    Location:
    98F6-98F6; 3-97 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (29059272..29062975, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (24884994..24888697, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene antisense RNA:CR46107 Neighboring gene uncharacterized protein Neighboring gene Sirtuin 7 Neighboring gene BRD4 interacting chromatin remodeling complex associated protein Neighboring gene long non-coding RNA:CR45030 Neighboring gene alpha-Mannosidase class I b

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein-macromolecule adaptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables ubiquitin ligase complex scaffold activity IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables ubiquitin protein ligase binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables ubiquitin protein ligase binding IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    part_of Cul5-RING ubiquitin ligase complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of Cul5-RING ubiquitin ligase complex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of SCF ubiquitin ligase complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of cullin-RING ubiquitin ligase complex IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    cullin 5
    Names
    CG1401-PA
    Cul5-PA
    Cullin-5
    cullin
    shackleton
    shakleton

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      29059272..29062975 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_143408.3NP_651665.2  cullin 5 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_651665.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VAQ0
      Related
      FBpp0084786
      Conserved Domains (3) summary
      smart00182
      Location:520655
      CULLIN; Cullin
      smart00884
      Location:779846
      Cullin_Nedd8; Cullin protein neddylation domain
      pfam00888
      Location:33743
      Cullin; Cullin family