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    CG5079 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 43089, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CG5079provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0039346
    Locus tag
    Dmel_CG5079
    See related
    AllianceGenome:FB:FBgn0039346
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG5079
    Orthologs
    all
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    Genomic context

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    See CG5079 in Genome Data Viewer
    Location:
    96E4-96E5; 3-88 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (25613666..25614451)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (21439527..21440040)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene musashi Neighboring gene long non-coding RNA:CR45910 Neighboring gene mir-1000 stem loop Neighboring gene yellow-emperor Neighboring gene Nuclear protein localization 4 Neighboring gene uncharacterized protein Neighboring gene Succinic semialdehyde dehydrogenase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Segmental duplication, microinversion, and gene loss associated with a complex inversion breakpoint region in Drosophila. Calvete O, et al. Mol Biol Evol, 2012 Jul. PMID 22328714, Free PMC Article
    2. High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression. Batut P, et al. Genome Res, 2013 Jan. PMID 22936248, Free PMC Article
    3. Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster. Liu X, et al. RNA, 2017 Dec. PMID 28851752, Free PMC Article
    4. The Release 6 reference sequence of the Drosophila melanogaster genome. Hoskins RA, et al. Genome Res, 2015 Mar. PMID 25589440, Free PMC Article
    5. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867, Free PMC Article

    See all (15) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG5079-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      25613666..25614451
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_143148.2 → NP_651405.1  uncharacterized protein Dmel_CG5079 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_651405.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q4V4Z8, Q4V5C3, Q9VBP8
      Related
      FBpp0084257
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VBP8 Q9VBP8

    Gene LinkOut

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