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    CG11854 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 43037, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG11854provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0039299
    Locus tag
    Dmel_CG11854
    See related
    AllianceGenome:FB:FBgn0039299
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG11854
    Summary
    Predicted to be active in extracellular space. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG11854 in Genome Data Viewer
    Location:
    96C7-96C7; 3-87 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (25242020..25243262)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (21067742..21068984)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Juvenile hormone binding protein 7 Neighboring gene takeout Neighboring gene bag of marbles Neighboring gene stable intronic sequence RNA CR46364 Neighboring gene Ribosomal protein S27 Neighboring gene Nucleoporin 37kD

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Optimising homing endonuclease gene drive performance in a semi-refractory species: the Drosophila melanogaster experience. Chan YS, et al. PLoS One, 2013. PMID 23349805, Free PMC Article
    2. A comparison of the transcriptome of Drosophila melanogaster in response to entomopathogenic fungus, ionizing radiation, starvation and cold shock. Moskalev A, et al. BMC Genomics, 2015. PMID 26694630, Free PMC Article
    3. Diversification of takeout, a male-biased gene family in Drosophila. Vanaphan N, et al. Gene, 2012 Jan 10. PMID 22020223
    4. The Drosophila takeout gene is regulated by the somatic sex-determination pathway and affects male courtship behavior. Dauwalder B, et al. Genes Dev, 2002 Nov 15. PMID 12435630, Free PMC Article
    5. The transcription factor Cabut coordinates energy metabolism and the circadian clock in response to sugar sensing. Bartok O, et al. EMBO J, 2015 Jun 3. PMID 25916830, Free PMC Article

    See all (28) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in multicellular organismal reproductive process IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in extracellular space ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG11854-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      25242020..25243262
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_143101.3 → NP_651358.4  uncharacterized protein Dmel_CG11854 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_651358.4

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0C4FEI7, Q4V3E5, Q9VBV1
      Conserved Domains (1) summary
      smart00700
      Location:21 → 249
      JHBP; Juvenile hormone binding protein domains in insects
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VBV1 Q9VBV1

    Gene LinkOut

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