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    CG6678 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 42581, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG6678provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0038917
    Locus tag
    Dmel_CG6678
    See related
    AllianceGenome:FB:FBgn0038917
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG6678
    Summary
    Is expressed in organism. Orthologous to human RCCD1 (RCC1 domain containing 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG6678 in Genome Data Viewer
    Location:
    93F14-93F14; 3-73 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (21887029..21907182)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (17712751..17732904)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene antisense RNA:CR45046 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene female-specific independent of transformer Neighboring gene dead end Neighboring gene uncharacterized protein Neighboring gene Quiescin sulfhydryl oxidase 3 Neighboring gene Quiescin sulfhydryl oxidase 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Conversion of plasma membrane topology during epithelial tube connection requires Arf-like 3 small GTPase in Drosophila. Kakihara K, et al. Mech Dev, 2008 Mar-Apr. PMID 18083504
    2. The Drosophila Dead end Arf-like3 GTPase controls vesicle trafficking during tracheal fusion cell morphogenesis. Jiang L, et al. Dev Biol, 2007 Nov 15. PMID 17919535, Free PMC Article
    3. Early-life nutrition interacts with developmental genes to shape the brain and sleep behavior in Drosophila melanogaster. Olivares GH, et al. Sleep, 2023 Apr 12. PMID 36718043
    4. Telomeric position effect--a third silencing mechanism in eukaryotes. Doheny JG, et al. PLoS One, 2008. PMID 19057646, Free PMC Article
    5. Latitudinal clines in gene expression and cis-regulatory element variation in Drosophila melanogaster. Juneja P, et al. BMC Genomics, 2016 Nov 28. PMID 27894253, Free PMC Article

    See all (28) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG6678-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      21887029..21907182
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_142739.3 → NP_650996.1  uncharacterized protein Dmel_CG6678 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_650996.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q95SZ0, Q9VD63
      Related
      FBpp0083546
      Conserved Domains (3) summary
      COG5184
      Location:78 → 371
      ATS1; Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]
      pfam00415
      Location:192 → 241
      RCC1; Regulator of chromosome condensation (RCC1) repeat
      pfam13540
      Location:228 → 257
      RCC1_2; Regulator of chromosome condensation (RCC1) repeat
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VD63 Q9VD63

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