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    meso18E meso18E [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 53448, updated on 9-Dec-2024

    Summary

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    Official Symbol
    meso18Eprovided by FlyBase
    Official Full Name
    meso18Eprovided by FlyBase
    Primary source
    FLYBASE:FBgn0040089
    Locus tag
    Dmel_CG14233
    See related
    AllianceGenome:FB:FBgn0040089
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    anon-18DEd; CG14233; Dmel\CG14233; Dmeso18E; eso18E; ld26007; Meso18E; Mmeso18E
    Summary
    Involved in mesoderm development. Is expressed in several structures, including dorsal pharyngeal muscle primordium; larval muscle cell; larval muscle system; mesoderm; and visceral mesoderm derivative. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See meso18E in Genome Data Viewer
    Location:
    18E2-18E3; 1-64 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (19706418..19713045, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (19600451..19607078, complement)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene Cell division cycle 42 Neighboring gene Threonyl-carbamoyl synthesis 4 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR44889 Neighboring gene uncharacterized protein Neighboring gene Adaptor Protein complex 1/2, beta subunit

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Dietary Stimuli, Intestinal Bacteria and Peptide Hormones Regulate Female Drosophila Defecation Rate. Kotronarou K, et al. Metabolites, 2023 Feb 12. PMID 36837883, Free PMC Article
    2. A novel Drosophila, mef2-regulated muscle gene isolated in a subtractive hybridization-based molecular screen using small amounts of zygotic mutant RNA. Taylor MV. Dev Biol, 2000 Apr 1. PMID 10720429
    3. Mononuclear muscle cells in Drosophila ovaries revealed by GFP protein traps. Hudson AM, et al. Dev Biol, 2008 Feb 15. PMID 18199432, Free PMC Article
    4. Drosophila miR-9a targets the ECM receptor Dystroglycan to canalize myotendinous junction formation. Yatsenko AS, et al. Dev Cell, 2014 Feb 10. PMID 24525189
    5. Invertebrate myogenesis: looking back to the future of muscle development. Baylies MK, et al. Curr Opin Genet Dev, 2001 Aug. PMID 11448630

    See all (31) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    mobile_element

    • Loc: c19711856-19710126 mobile_element_type = transposon:S{}173

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in mesoderm development IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    meso18E
    Names
    CG14233-PA
    CG14233-PB
    CG14233-PC
    CG14233-PD
    meso18E-PA
    meso18E-PB
    meso18E-PC
    meso18E-PD

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      19706418..19713045 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_144358.3 → NP_652615.1  meso18E, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_652615.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9V3Z3
      Related
      FBpp0074581
      Conserved Domains (1) summary
      pfam13837
      Location:23 → 106
      Myb_DNA-bind_4; Myb/SANT-like DNA-binding domain

    2. NM_001298531.1 → NP_001285460.1  meso18E, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001285460.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9V3Z3
      Conserved Domains (1) summary
      pfam13837
      Location:23 → 106
      Myb_DNA-bind_4; Myb/SANT-like DNA-binding domain

    3. NM_001298532.1 → NP_001285461.1  meso18E, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001285461.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9V3Z3
      Conserved Domains (1) summary
      pfam13837
      Location:23 → 106
      Myb_DNA-bind_4; Myb/SANT-like DNA-binding domain

    4. NM_001169328.2 → NP_001162799.1  meso18E, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001162799.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9V3Z3
      Conserved Domains (1) summary
      pfam13837
      Location:23 → 106
      Myb_DNA-bind_4; Myb/SANT-like DNA-binding domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9V3Z3 Q9V3Z3

    Gene LinkOut

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