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    hpRNA:CR32207 hairpin RNA:CR32207 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 10178801, updated on 28-Oct-2024

    Summary

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    Official Symbol
    hpRNA:CR32207provided by FlyBase
    Official Full Name
    hairpin RNA:CR32207provided by FlyBase
    Primary source
    FLYBASE:FBgn0052207
    Locus tag
    Dmel_CR32207
    See related
    AllianceGenome:FB:FBgn0052207
    Gene type
    ncRNA
    RNA name
    other
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:LD41276; CG32207; CR32207; Dmel\CR32207; esi-4.1; hp-CR32207
    Old locus tag
    Dmel_CG32207
    NEW
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    Genomic context

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    See hpRNA:CR32207 in Genome Data Viewer
    Location:
    76B3-76B3; 3-45 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (19477329..19478720, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (19468730..19471820, complement)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene antisense RNA:CR46047 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene pseudo Neighboring gene brivido-1 Neighboring gene hairpin RNA:CR33940 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic screening of the genes interacting with Drosophila FIG4 identified a novel link between CMT-causing gene and long noncoding RNAs. Muraoka Y, et al. Exp Neurol, 2018 Dec. PMID 30165075
    2. Processing of Drosophila endo-siRNAs depends on a specific Loquacious isoform. Zhou R, et al. RNA, 2009 Oct. PMID 19635780, Free PMC Article
    3. Protein degradation of Lsd1 is mediated by Bre1 yet opposed by Lsd1-interacting lncRNAs during fly follicle development. Lin CT, et al. iScience, 2024 May 17. PMID 38655201, Free PMC Article
    4. The Drosophila hairpin RNA pathway generates endogenous short interfering RNAs. Okamura K, et al. Nature, 2008 Jun 5. PMID 18463630, Free PMC Article
    5. Adaptive regulation of testis gene expression and control of male fertility by the Drosophila hairpin RNA pathway. [Corrected]. Wen J, et al. Mol Cell, 2015 Jan 8. PMID 25544562, Free PMC Article

    See all (18) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    • putative non-coding RNA; hpRNA:CR32207-RD; Dmel\hpRNA:CR32207-RD; CR32207-RD; Dmel\CR32207-RD

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      19477329..19478720 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. NR_156767.1 RNA Sequence

      Status: REVIEWED

    Nucleotide Protein
    Heading Accession and Version

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