U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    NimB1 Nimrod B1 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 34813, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    NimB1provided by FlyBase
    Official Full Name
    Nimrod B1provided by FlyBase
    Primary source
    FLYBASE:FBgn0027929
    Locus tag
    Dmel_CG33119
    See related
    AllianceGenome:FB:FBgn0027929
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:GH07762; BG:DS00180.12; CG33119; CG8855; CT25428; Dmel\CG33119; DS00180.12; nim B1; nimB1
    Summary
    Predicted to be located in extracellular region. Is expressed in embryonic/larval fat body and larval muscle system. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See NimB1 in Genome Data Viewer
    Location:
    34E5-34E5; 2-50 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (13963507..13965088)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (13963507..13965088)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene Ance-3 Neighboring gene Vajk3 Neighboring gene Nimrod A Neighboring gene Nimrod B2 Neighboring gene Nimrod B3 Neighboring gene Nimrod B4

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Evolution of genes and repeats in the Nimrod superfamily. Somogyi K, et al. Mol Biol Evol, 2008 Nov. PMID 18703524
    2. A secreted factor NimrodB4 promotes the elimination of apoptotic corpses by phagocytes in Drosophila. Petrignani B, et al. EMBO Rep, 2021 Sep 6. PMID 34370384, Free PMC Article
    3. Nimrod, a putative phagocytosis receptor with EGF repeats in Drosophila plasmatocytes. Kurucz E, et al. Curr Biol, 2007 Apr 3. PMID 17363253
    4. The adipokine NimrodB5 regulates peripheral hematopoiesis in Drosophila. Ramond E, et al. FEBS J, 2020 Aug. PMID 32009293
    5. Drosophila melanogaster heterochromatin protein HP1b plays important roles in transcriptional activation and development. Zhang D, et al. Chromosoma, 2011 Feb. PMID 20857302

    See all (47) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in immune response IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in phagocytosis IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    nimrod B1
    Names
    CG33119-PA
    CG33119-PB
    NimB1-PA
    NimB1-PB

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      13963507..13965088
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001273523.2 → NP_001260452.1  nimrod B1, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001260452.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9PFV3

    2. NM_176031.3 → NP_788045.1  nimrod B1, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_788045.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9U742, Q9VJU9
      Related
      FBpp0080162
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    M9PFV3 M9PFV3
    Q9VJU9 Q9VJU9

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools