U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Cnx99A Calnexin 99A [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 44643, updated on 17-Dec-2024

    Summary

    Official Symbol
    Cnx99Aprovided by FlyBase
    Official Full Name
    Calnexin 99Aprovided by FlyBase
    Primary source
    FLYBASE:FBgn0015622
    Locus tag
    Dmel_CG11958
    See related
    AllianceGenome:FB:FBgn0015622
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG11958; cnx; Cnx; cnx99A; Cnx99a; Dmel\CG11958
    Summary
    Predicted to enable calcium ion binding activity. Involved in protein stabilization; regulation of calcium ion transport into cytosol; and rhodopsin biosynthetic process. Located in endoplasmic reticulum membrane and perinuclear endoplasmic reticulum. Is expressed in adult head; adult heart; larval midline neurons; and photoreceptor neurons. Orthologous to human CLGN (calmegin) and CANX (calnexin). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Cnx99A in Genome Data Viewer
    Location:
    99A7-99A7; 3-98 cM
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (29315254..29319644, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (25140976..25145366, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR45568 Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR45547 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables calcium ion binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables unfolded protein binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in ERAD pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in protein folding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in protein folding IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in protein stabilization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in regulation of calcium ion transport into cytosol IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in rhodopsin biosynthetic process IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in rhodopsin biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in endomembrane system HDA PubMed 
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in endoplasmic reticulum membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in endoplasmic reticulum membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in perinuclear endoplasmic reticulum IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in plasma membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 

    General protein information

    Preferred Names
    calnexin 99A
    Names
    CG11958-PA
    CG11958-PB
    CG11958-PD
    CG11958-PE
    Calnexin99A
    Cnx99A-PA
    Cnx99A-PB
    Cnx99A-PD
    Cnx99A-PE
    calnexin

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      29315254..29319644 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_170407.3NP_733286.1  calnexin 99A, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_733286.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      O02393, Q86P87, Q9VAL7
      Related
      FBpp0084803
      Conserved Domains (1) summary
      pfam00262
      Location:74447
      Calreticulin; Calreticulin family
    2. NM_057809.5NP_477157.1  calnexin 99A, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_477157.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      O02393, Q86P87, Q9VAL7
      Related
      FBpp0084804
      Conserved Domains (1) summary
      pfam00262
      Location:74447
      Calreticulin; Calreticulin family
    3. NM_001043301.2NP_001036766.2  calnexin 99A, isoform E [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001036766.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      O02393, Q0KHZ9, Q86P87
      Conserved Domains (1) summary
      pfam00262
      Location:74447
      Calreticulin; Calreticulin family
    4. NM_001043302.2NP_001036767.1  calnexin 99A, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001036767.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      O02393, Q86P87, Q9VAL7
      Conserved Domains (1) summary
      pfam00262
      Location:74447
      Calreticulin; Calreticulin family