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    PCDH7 protocadherin 7 [ Macaca fascicularis (crab-eating macaque) ]

    Gene ID: 102118854, updated on 3-Dec-2024

    Summary

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    Gene symbol
    PCDH7
    Gene description
    protocadherin 7
    See related
    Ensembl:ENSMFAG00000040327
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca fascicularis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See PCDH7 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_05 current T2T-MFA8v1.0 (GCF_037993035.1) 5 NC_088379.1 (29921946..30349856)
    102 previous assembly MFA1912RKSv2 (GCF_012559485.2) 5 NC_052259.1 (29749895..30178704)

    Chromosome 5 - NC_088379.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC135970778 Neighboring gene uncharacterized LOC135970894 Neighboring gene uncharacterized LOC135970895 Neighboring gene uncharacterized LOC123573557 Neighboring gene uncharacterized LOC107129671

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protocadherin-7

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_037993035.1-RS_2024_05

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference T2T-MFA8v1.0

    Genomic

    1. NC_088379.1 Reference T2T-MFA8v1.0

      Range
      29921946..30349856
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_045392223.2 → XP_045248158.2  protocadherin-7 isoform X2

      UniProtKB/TrEMBL
      G7P5D7

    2. XM_065544846.1 → XP_065400918.1  protocadherin-7 isoform X6

      UniProtKB/TrEMBL
      G7P5D7

    3. XM_015450225.3 → XP_015305711.3  protocadherin-7 isoform X1

      UniProtKB/TrEMBL
      G7P5D7

    4. XM_015450226.3 → XP_015305712.3  protocadherin-7 isoform X3

      UniProtKB/TrEMBL
      G7P5D7

    5. XM_045392224.2 → XP_045248159.2  protocadherin-7 isoform X5

      UniProtKB/TrEMBL
      G7P5D7

    6. XM_015450227.3 → XP_015305713.3  protocadherin-7 isoform X8

      UniProtKB/TrEMBL
      G7P5D7

    7. XM_005554640.4 → XP_005554697.3  protocadherin-7 isoform X4

      UniProtKB/TrEMBL
      G7P5D7

    8. XM_005554641.4 → XP_005554698.3  protocadherin-7 isoform X7

      UniProtKB/TrEMBL
      G7P5D7

    9. XM_065544847.1 → XP_065400919.1  protocadherin-7 isoform X9

      UniProtKB/TrEMBL
      G7P5D7

    10. XM_065544848.1 → XP_065400920.1  protocadherin-7 isoform X10

      UniProtKB/TrEMBL
      G7P5D7

    11. XM_045392226.2 → XP_045248161.2  protocadherin-7 isoform X14

      UniProtKB/TrEMBL
      A0A2K5U4A7

    12. XM_015450229.3 → XP_015305715.3  protocadherin-7 isoform X11

      UniProtKB/TrEMBL
      A0A2K5U4A7

    13. XM_065544849.1 → XP_065400921.1  protocadherin-7 isoform X12

      UniProtKB/TrEMBL
      A0A2K5U4A7

    14. XM_005554642.4 → XP_005554699.3  protocadherin-7 isoform X13

      UniProtKB/TrEMBL
      A0A2K5U4A7
    Nucleotide Protein
    Heading Accession and Version

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