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    Cimip1 ciliary microtubule inner protein 1 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 689618, updated on 9-Dec-2024

    Summary

    Official Symbol
    Cimip1provided by RGD
    Official Full Name
    ciliary microtubule inner protein 1provided by RGD
    Primary source
    RGD:1589960
    See related
    EnsemblRapid:ENSRNOG00000028533 AllianceGenome:RGD:1589960
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    C3h20orf85
    Summary
    Predicted to be located in cilium. Orthologous to human CIMIP1 (ciliary microtubule inner protein 1). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Restricted expression toward (RPKM 492.2) See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Cimip1 in Genome Data Viewer
    Location:
    3q42
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 3 NC_086021.1 (182733242..182740733)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 3 NC_051338.1 (162315542..162322456)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 3 NC_005102.4 (171597319..171604094)

    Chromosome 3 - NC_086021.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103691986 Neighboring gene capping actin protein, gelsolin like, pseudogene 1 Neighboring gene RNA, U6 small nuclear 1162 Neighboring gene uncharacterized LOC134486504 Neighboring gene ankyrin repeat domain 60

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    ciliary microtubule inner protein 1
    Names
    uncharacterized protein C20orf85 homolog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001109542.1NP_001103012.1  ciliary microtubule inner protein 1

      See identical proteins and their annotated locations for NP_001103012.1

      Status: PROVISIONAL

      Source sequence(s)
      CH474062
      UniProtKB/TrEMBL
      A6KL04, D4A8H6
      Related
      ENSRNOP00000030660.2, ENSRNOT00000029558.5
      Conserved Domains (1) summary
      pfam14945
      Location:16133
      LLC1; Normal lung function maintenance, Low in Lung Cancer 1 protein

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086021.1 Reference GRCr8

      Range
      182733242..182740733
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063284577.1XP_063140647.1  ciliary microtubule inner protein 1 isoform X1

      UniProtKB/TrEMBL
      A6KL04, D4A8H6